Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm43512-201ENSMUST00000198495 176 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm19855-201ENSMUST00000210145 249 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm24038-201ENSMUST00000082872 159 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm12449-201ENSMUST00000117572 234 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm16328-201ENSMUST00000126985 196 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm23043-201ENSMUST00000157890 109 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm25494-201ENSMUST00000158143 100 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm25658-201ENSMUST00000158472 128 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Snord87-201ENSMUST00000175437 87 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ubfd1Q78JW9 Gm23950-201ENSMUST00000104026 129 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Snord89-201ENSMUST00000104516 110 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Gm15281-201ENSMUST00000125181 351 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Gm23864-201ENSMUST00000177607 107 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Gm29604-201ENSMUST00000187176 163 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Snora3-201ENSMUST00000083082 132 ntBASIC1.97□□□□□ -2.09
Ubfd1Q78JW9 Gm26339-201ENSMUST00000102368 99 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Mir466h-201ENSMUST00000104748 81 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm6444-201ENSMUST00000119611 458 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm23670-201ENSMUST00000157469 119 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm22586-201ENSMUST00000157507 122 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Mir6901-201ENSMUST00000185062 62 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm44052-201ENSMUST00000203382 396 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm45002-201ENSMUST00000208045 120 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm24457-201ENSMUST00000083196 105 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm23461-201ENSMUST00000083265 107 ntBASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Ubfd1Q78JW9 Gm6025-201ENSMUST00000121517 201 ntBASIC1.95□□□□□ -2.1
Ubfd1Q78JW9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.95□□□□□ -2.1
Ubfd1Q78JW9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.95□□□□□ -2.1
Ubfd1Q78JW9 Mir7217-201ENSMUST00000200304 62 ntBASIC1.95□□□□□ -2.1
Ubfd1Q78JW9 Gm26225-201ENSMUST00000082508 135 ntBASIC1.95□□□□□ -2.1
Ubfd1Q78JW9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm14536-201ENSMUST00000118324 138 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm16032-201ENSMUST00000118534 168 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm15027-201ENSMUST00000120922 138 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm42719-201ENSMUST00000197393 355 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm25402-201ENSMUST00000082966 131 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm25895-201ENSMUST00000083714 100 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Ubfd1Q78JW9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm24132-201ENSMUST00000104745 91 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm23655-201ENSMUST00000122627 105 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm25460-201ENSMUST00000157954 127 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm25223-201ENSMUST00000158200 110 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm6003-201ENSMUST00000187903 463 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm43199-201ENSMUST00000200019 307 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ubfd1Q78JW9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 Gm24177-201ENSMUST00000158927 131 ntBASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ubfd1Q78JW9 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Mir758-201ENSMUST00000103260 81 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm27465-201ENSMUST00000184290 91 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm28537-201ENSMUST00000189026 315 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm29631-201ENSMUST00000191065 315 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm44408-201ENSMUST00000200205 66 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm36189-201ENSMUST00000204113 523 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Snora69-201ENSMUST00000083708 131 ntBASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ubfd1Q78JW9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Ubfd1Q78JW9 Gm25538-201ENSMUST00000101943 107 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm23109-201ENSMUST00000116867 126 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm23048-201ENSMUST00000157237 129 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Mir669n-201ENSMUST00000158636 54 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm26864-201ENSMUST00000181346 156 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Mir7026-201ENSMUST00000184384 67 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm44326-201ENSMUST00000198226 101 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Mir471-201ENSMUST00000093596 67 ntBASIC1.9□□□□□ -2.11
Ubfd1Q78JW9 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.89□□□□□ -2.11
Ubfd1Q78JW9 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms