Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm25054-201ENSMUST00000157370 97 ntBASIC0.08□□□□□ -2.4
Scn10aQ6QIY3 Gm22631-201ENSMUST00000179656 94 ntBASIC0.08□□□□□ -2.4
Scn10aQ6QIY3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.08□□□□□ -2.4
Scn10aQ6QIY3 Gm22454-201ENSMUST00000082583 107 ntBASIC0.08□□□□□ -2.4
Scn10aQ6QIY3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 Gm14287-201ENSMUST00000121060 117 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 Gm26274-201ENSMUST00000157103 321 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 Gm24409-201ENSMUST00000157881 152 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 AC121844.1-201ENSMUST00000218706 137 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 Gm25627-201ENSMUST00000084003 153 ntBASIC0.07□□□□□ -2.4
Scn10aQ6QIY3 Gm22834-201ENSMUST00000102021 79 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm25952-201ENSMUST00000175329 74 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm22114-201ENSMUST00000177756 107 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Zfp950-206ENSMUST00000178819 171 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm28992-201ENSMUST00000190534 139 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm23690-201ENSMUST00000083036 94 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Mir190b-201ENSMUST00000104803 80 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm28001-201ENSMUST00000183561 117 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm6003-201ENSMUST00000187903 463 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Gm5034-201ENSMUST00000199115 634 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Scn10aQ6QIY3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm12837-201ENSMUST00000120131 373 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm23838-201ENSMUST00000158067 162 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm22914-201ENSMUST00000175195 77 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm7654-201ENSMUST00000186738 683 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm44395-201ENSMUST00000197056 153 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Mir214-201ENSMUST00000083582 110 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Mir487b-201ENSMUST00000102265 82 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm16032-201ENSMUST00000118534 168 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm38261-201ENSMUST00000192608 316 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Snora16a-202ENSMUST00000196061 137 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm22685-201ENSMUST00000082848 106 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm24355-201ENSMUST00000082858 122 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Gm25859-201ENSMUST00000083710 91 ntBASIC0.05□□□□□ -2.4
Scn10aQ6QIY3 Snord98-201ENSMUST00000116819 65 ntBASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 Gm15379-201ENSMUST00000121224 648 ntBASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 Gm23169-201ENSMUST00000157157 112 ntBASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 Gm18588-201ENSMUST00000177308 492 ntBASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 Gm29229-201ENSMUST00000188874 323 ntBASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.04□□□□□ -2.4
Scn10aQ6QIY3 Gm14296-202ENSMUST00000108931 750 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Gm14269-201ENSMUST00000120455 306 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Mir1931-201ENSMUST00000158589 119 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Gm45374-201ENSMUST00000211388 136 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Mir30a-201ENSMUST00000083471 71 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Mir500-201ENSMUST00000093600 92 ntBASIC0.03□□□□□ -2.4
Scn10aQ6QIY3 Snord91a-201ENSMUST00000104305 93 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm28926-201ENSMUST00000191063 680 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm37586-201ENSMUST00000193654 204 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm44455-201ENSMUST00000200061 82 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm19572-201ENSMUST00000214326 338 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm25801-201ENSMUST00000082638 106 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.03□□□□□ -2.41
Scn10aQ6QIY3 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Mir654-201ENSMUST00000104787 84 ntBASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Mir880-201ENSMUST00000104809 78 ntBASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Gm24577-201ENSMUST00000158580 63 ntBASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Gm22200-201ENSMUST00000158614 67 ntBASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Scn10aQ6QIY3 Gm15289-201ENSMUST00000117793 244 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Mir411-201ENSMUST00000083543 82 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm14491-201ENSMUST00000121919 199 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm25825-201ENSMUST00000157091 124 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm23145-201ENSMUST00000178912 79 ntBASIC0.01□□□□□ -2.41
Scn10aQ6QIY3 Gm42988-201ENSMUST00000198116 225 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms