Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm25423-201ENSMUST00000157609 107 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm24006-201ENSMUST00000158462 132 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm9251-201ENSMUST00000197202 628 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.81□□□□□ -2.12
Smarca1Q6PGB8 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm23170-201ENSMUST00000157158 106 ntBASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm26181-201ENSMUST00000157687 106 ntBASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm23002-201ENSMUST00000179221 107 ntBASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm34139-201ENSMUST00000196166 294 ntBASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm24453-201ENSMUST00000083346 76 ntBASIC1.8□□□□□ -2.12
Smarca1Q6PGB8 Gm25068-201ENSMUST00000103895 110 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm11936-201ENSMUST00000118323 160 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm23665-201ENSMUST00000158054 62 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm29022-201ENSMUST00000190702 225 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm44563-201ENSMUST00000207958 178 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm25141-201ENSMUST00000083177 107 ntBASIC1.79□□□□□ -2.12
Smarca1Q6PGB8 Gm16032-201ENSMUST00000118534 168 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm14709-201ENSMUST00000121225 304 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm24902-201ENSMUST00000158126 123 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm25718-201ENSMUST00000158632 118 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm28383-201ENSMUST00000187563 139 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm29262-201ENSMUST00000190084 196 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm18433-201ENSMUST00000192747 197 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.78□□□□□ -2.12
Smarca1Q6PGB8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 Gm13801-201ENSMUST00000120750 160 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 Gm44325-201ENSMUST00000196757 77 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 Snord14a-201ENSMUST00000082807 87 ntBASIC1.77□□□□□ -2.13
Smarca1Q6PGB8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm24229-201ENSMUST00000158830 118 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm22951-201ENSMUST00000179471 107 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm28794-201ENSMUST00000185276 136 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm45754-201ENSMUST00000212380 279 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.76□□□□□ -2.13
Smarca1Q6PGB8 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Gm2962-201ENSMUST00000159266 336 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Gm27326-201ENSMUST00000183504 95 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Gm28409-201ENSMUST00000187064 103 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.75□□□□□ -2.13
Smarca1Q6PGB8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.74□□□□□ -2.13
Smarca1Q6PGB8 Gm11204-201ENSMUST00000122438 147 ntBASIC1.74□□□□□ -2.13
Smarca1Q6PGB8 Gm22553-201ENSMUST00000157797 295 ntBASIC1.74□□□□□ -2.13
Smarca1Q6PGB8 Gm44409-201ENSMUST00000198810 166 ntBASIC1.74□□□□□ -2.13
Smarca1Q6PGB8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Smarca1Q6PGB8 Gm24594-201ENSMUST00000122502 99 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Gm24379-201ENSMUST00000122695 86 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Gm28724-201ENSMUST00000186149 625 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Gm44989-201ENSMUST00000204749 217 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Smarca1Q6PGB8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Mir881-201ENSMUST00000104844 78 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Gm25424-201ENSMUST00000157612 58 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Mir7675-201ENSMUST00000184262 58 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Mir7241-201ENSMUST00000184532 64 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 mt-Td-201ENSMUST00000082404 70 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Gm25627-201ENSMUST00000084003 153 ntBASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.72□□□□□ -2.13
Smarca1Q6PGB8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Mir669g-201ENSMUST00000116809 123 ntBASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Gm23718-201ENSMUST00000157350 307 ntBASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Gm24677-201ENSMUST00000158755 150 ntBASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.71□□□□□ -2.14
Smarca1Q6PGB8 Gm26156-201ENSMUST00000116999 123 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm14536-201ENSMUST00000118324 138 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm15027-201ENSMUST00000120922 138 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm23466-201ENSMUST00000157133 106 ntBASIC1.7□□□□□ -2.14
Smarca1Q6PGB8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms