Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mir466k-201ENSMUST00000116774 122 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Gm22557-201ENSMUST00000157804 102 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Gm24771-201ENSMUST00000158508 137 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Gm27505-201ENSMUST00000185071 110 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Mir186-201ENSMUST00000083497 71 ntBASIC2.14□□□□□ -2.07
Rnf220Q6PDX6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm25376-201ENSMUST00000104340 133 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm22148-201ENSMUST00000104445 107 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Mir1931-201ENSMUST00000158589 119 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm24106-201ENSMUST00000175498 127 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm44921-201ENSMUST00000205290 301 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm25697-201ENSMUST00000082902 98 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.13□□□□□ -2.07
Rnf220Q6PDX6 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm23990-201ENSMUST00000117031 117 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm25323-201ENSMUST00000122555 103 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm25599-201ENSMUST00000157816 103 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm9251-201ENSMUST00000197202 628 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm44393-201ENSMUST00000197418 138 ntBASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.12□□□□□ -2.07
Rnf220Q6PDX6 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm25153-201ENSMUST00000157118 156 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm24958-201ENSMUST00000158009 97 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm24131-201ENSMUST00000158539 107 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm44922-201ENSMUST00000206690 90 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm20734-201ENSMUST00000216939 193 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.11□□□□□ -2.07
Rnf220Q6PDX6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm23172-201ENSMUST00000157160 124 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm23181-201ENSMUST00000158685 110 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm28669-201ENSMUST00000188400 100 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm38364-201ENSMUST00000191814 179 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm22306-201ENSMUST00000082692 107 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm22622-201ENSMUST00000082870 129 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm22704-201ENSMUST00000083027 137 ntBASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.1□□□□□ -2.07
Rnf220Q6PDX6 Gm24984-201ENSMUST00000104454 133 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm22477-201ENSMUST00000122569 316 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm15692-201ENSMUST00000152173 352 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm25828-201ENSMUST00000157087 95 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm22606-201ENSMUST00000158290 103 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm16561-201ENSMUST00000163001 192 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Mir3057-201ENSMUST00000175040 91 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm23813-201ENSMUST00000175153 77 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm25730-201ENSMUST00000178753 165 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm43602-201ENSMUST00000196772 300 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Rnf220Q6PDX6 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm13922-201ENSMUST00000119505 156 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm22850-201ENSMUST00000157714 82 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm25558-201ENSMUST00000158083 106 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm24770-201ENSMUST00000158505 92 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm26097-201ENSMUST00000179642 93 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Mir6995-201ENSMUST00000183658 71 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Gm45452-201ENSMUST00000210905 177 ntBASIC2.08□□□□□ -2.08
Rnf220Q6PDX6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm24171-201ENSMUST00000104126 131 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm26247-201ENSMUST00000116702 91 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm13246-201ENSMUST00000120994 315 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm23208-201ENSMUST00000158666 127 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm16584-201ENSMUST00000159267 189 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm22348-201ENSMUST00000178674 79 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm26864-201ENSMUST00000181346 156 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Mir7081-201ENSMUST00000184490 75 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Mir7062-201ENSMUST00000185038 66 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Mir221-201ENSMUST00000083488 95 ntBASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.07□□□□□ -2.08
Rnf220Q6PDX6 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 Gm15069-201ENSMUST00000117792 192 ntBASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 Gm15068-201ENSMUST00000119796 192 ntBASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 Gm24366-201ENSMUST00000175383 86 ntBASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 Gm43587-201ENSMUST00000199590 204 ntBASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Rnf220Q6PDX6 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Gm22545-201ENSMUST00000104350 132 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Gm22163-201ENSMUST00000158408 135 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Gm26004-201ENSMUST00000158804 116 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Gm16546-201ENSMUST00000159442 355 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Mir490-201ENSMUST00000093567 84 ntBASIC2.05□□□□□ -2.08
Rnf220Q6PDX6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Rnf220Q6PDX6 Gm23803-201ENSMUST00000104610 132 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 283.7 ms