Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Herc4Q6PAV2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Herc4Q6PAV2 Mir881-201ENSMUST00000104844 78 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm12797-201ENSMUST00000118645 273 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm7958-201ENSMUST00000178255 468 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm7950-201ENSMUST00000179633 468 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm28921-201ENSMUST00000190219 378 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm5010-201ENSMUST00000213131 260 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm26479-201ENSMUST00000122620 106 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm27579-201ENSMUST00000158113 63 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm24729-201ENSMUST00000158225 137 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Mir7665-201ENSMUST00000184907 63 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm37763-201ENSMUST00000193445 120 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm9795-201ENSMUST00000062156 693 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Rny1-201ENSMUST00000083767 112 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm26082-201ENSMUST00000104070 127 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25875-201ENSMUST00000104323 107 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm23705-201ENSMUST00000104370 130 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25718-201ENSMUST00000158632 118 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm24415-201ENSMUST00000180218 107 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25357-201ENSMUST00000082745 72 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25410-201ENSMUST00000083758 137 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25943-201ENSMUST00000103791 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm25285-201ENSMUST00000178951 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm29308-201ENSMUST00000188863 315 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir653-201ENSMUST00000102402 85 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm12686-201ENSMUST00000120546 397 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm14922-201ENSMUST00000121131 163 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm23982-201ENSMUST00000157141 106 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26049-201ENSMUST00000157313 108 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26287-201ENSMUST00000158887 81 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm22450-201ENSMUST00000179641 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm25473-201ENSMUST00000180191 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm28537-201ENSMUST00000189026 315 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm29631-201ENSMUST00000191065 315 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm10092-201ENSMUST00000077110 180 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24856-201ENSMUST00000082809 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26495-201ENSMUST00000083152 137 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26071-201ENSMUST00000083261 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24521-201ENSMUST00000083958 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24423-201ENSMUST00000101982 106 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm22784-201ENSMUST00000104088 132 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm22433-201ENSMUST00000158550 142 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm25615-201ENSMUST00000177836 94 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Mir6240-201ENSMUST00000184281 117 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm27545-201ENSMUST00000184755 202 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm29022-201ENSMUST00000190702 225 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm24204-201ENSMUST00000082950 107 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm25565-201ENSMUST00000104605 105 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm22883-201ENSMUST00000157376 106 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm24392-201ENSMUST00000158136 103 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm23208-201ENSMUST00000158666 127 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm24667-201ENSMUST00000158938 103 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Mir8119-201ENSMUST00000183371 129 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Mir6540-201ENSMUST00000184886 108 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm22673-201ENSMUST00000104415 131 ntBASIC1.46□□□□□ -2.18
Herc4Q6PAV2 Gm12309-201ENSMUST00000119889 182 ntBASIC1.46□□□□□ -2.18
Herc4Q6PAV2 Gm14846-201ENSMUST00000121868 216 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms