Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm25235-201ENSMUST00000179933 107 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Mir6336-201ENSMUST00000183581 130 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm27545-201ENSMUST00000184755 202 ntBASIC1.54□□□□□ -2.16
Hmgb4Q6P8W9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm34139-201ENSMUST00000196166 294 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm42719-201ENSMUST00000197393 355 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Hmgb4Q6P8W9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm24635-201ENSMUST00000122712 128 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm25825-201ENSMUST00000157091 124 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm2962-201ENSMUST00000159266 336 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Snora19-201ENSMUST00000082962 132 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm23658-201ENSMUST00000083233 132 ntBASIC1.52□□□□□ -2.17
Hmgb4Q6P8W9 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm15379-201ENSMUST00000121224 648 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm13560-201ENSMUST00000121865 329 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm14846-201ENSMUST00000121868 216 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm25643-201ENSMUST00000158874 103 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm24453-201ENSMUST00000083346 76 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.51□□□□□ -2.17
Hmgb4Q6P8W9 Gm25362-201ENSMUST00000158854 105 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Gm44325-201ENSMUST00000196757 77 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Gm22358-201ENSMUST00000082877 122 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Gm25188-201ENSMUST00000083913 122 ntBASIC1.5□□□□□ -2.17
Hmgb4Q6P8W9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm22228-201ENSMUST00000157364 101 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm44563-201ENSMUST00000207958 178 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.49□□□□□ -2.17
Hmgb4Q6P8W9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Gm23194-201ENSMUST00000158813 105 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Gm23571-201ENSMUST00000180073 127 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Gm29022-201ENSMUST00000190702 225 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.48□□□□□ -2.17
Hmgb4Q6P8W9 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm23219-201ENSMUST00000158123 87 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm24006-201ENSMUST00000158462 132 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Gm9251-201ENSMUST00000197202 628 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Hmgb4Q6P8W9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.17
Hmgb4Q6P8W9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Gm14536-201ENSMUST00000118324 138 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Gm15027-201ENSMUST00000120922 138 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Gm25697-201ENSMUST00000082902 98 ntBASIC1.46□□□□□ -2.18
Hmgb4Q6P8W9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Hmgb4Q6P8W9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.45□□□□□ -2.18
Hmgb4Q6P8W9 Gm25424-201ENSMUST00000157612 58 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms