Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Sp140Q6NSQ5 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sp140Q6NSQ5 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm22731-201ENSMUST00000158086 94 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm24054-201ENSMUST00000158619 105 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Mir3075-201ENSMUST00000175340 85 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Mir6376-201ENSMUST00000185149 131 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm28409-201ENSMUST00000187064 103 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm35736-201ENSMUST00000203681 313 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm18502-201ENSMUST00000218679 199 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Snord118-201ENSMUST00000082965 135 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.21□□□□□ -2.06
Sp140Q6NSQ5 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm23320-201ENSMUST00000104462 127 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm22093-201ENSMUST00000158980 111 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm23922-201ENSMUST00000178792 79 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm24657-201ENSMUST00000180085 79 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm22996-201ENSMUST00000180236 79 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm38364-201ENSMUST00000191814 179 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Snora69-201ENSMUST00000083708 131 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Mir127-201ENSMUST00000093568 70 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.2□□□□□ -2.06
Sp140Q6NSQ5 Gm22373-201ENSMUST00000104584 89 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Gm24900-201ENSMUST00000158128 134 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Gm26360-201ENSMUST00000158872 103 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Gm23090-201ENSMUST00000177331 78 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Gm37116-201ENSMUST00000195161 147 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sp140Q6NSQ5 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm25376-201ENSMUST00000104340 133 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm23651-201ENSMUST00000116755 120 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm24837-201ENSMUST00000158683 81 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Mir3961-201ENSMUST00000198795 59 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm44057-201ENSMUST00000204547 96 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Sp140Q6NSQ5 Gm24049-201ENSMUST00000102409 100 ntBASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Gm22384-201ENSMUST00000158187 104 ntBASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Gm9156-201ENSMUST00000189660 463 ntBASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.17□□□□□ -2.06
Sp140Q6NSQ5 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm26015-201ENSMUST00000104402 125 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Mir293-201ENSMUST00000104841 80 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm25529-201ENSMUST00000104850 92 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm25323-201ENSMUST00000122555 103 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm22338-201ENSMUST00000157715 129 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm25371-201ENSMUST00000158162 101 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Mir7081-201ENSMUST00000184490 75 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm29603-201ENSMUST00000186792 334 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm29604-201ENSMUST00000187176 163 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm6109-201ENSMUST00000223297 348 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Gm10351-201ENSMUST00000087694 125 ntBASIC2.16□□□□□ -2.06
Sp140Q6NSQ5 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Gm23772-201ENSMUST00000104433 102 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Gm25814-201ENSMUST00000082754 107 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Gm25136-201ENSMUST00000083253 115 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Mir93-201ENSMUST00000083593 88 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Gm24698-201ENSMUST00000083883 130 ntBASIC2.15□□□□□ -2.07
Sp140Q6NSQ5 Mir669b-201ENSMUST00000102172 97 ntBASIC2.14□□□□□ -2.07
Sp140Q6NSQ5 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.14□□□□□ -2.07
Sp140Q6NSQ5 Gm23080-201ENSMUST00000157846 103 ntBASIC2.14□□□□□ -2.07
Sp140Q6NSQ5 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.14□□□□□ -2.07
Sp140Q6NSQ5 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.14□□□□□ -2.07
Sp140Q6NSQ5 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm22674-201ENSMUST00000104413 131 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Mir1195-201ENSMUST00000116818 98 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm26049-201ENSMUST00000157313 108 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm24010-201ENSMUST00000157731 282 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm22349-201ENSMUST00000157864 107 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm22612-201ENSMUST00000158293 101 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm22159-201ENSMUST00000158412 130 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm27399-201ENSMUST00000184250 78 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm9251-201ENSMUST00000197202 628 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm23947-201ENSMUST00000093636 107 ntBASIC2.13□□□□□ -2.07
Sp140Q6NSQ5 Gm24232-201ENSMUST00000104314 132 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms