Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm25579-201ENSMUST00000083407 106 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Mir410-201ENSMUST00000083563 81 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm22003-201ENSMUST00000101885 107 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm13560-201ENSMUST00000121865 329 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm20462-201ENSMUST00000172623 408 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm25314-201ENSMUST00000178810 79 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm22756-201ENSMUST00000180118 107 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm23095-201ENSMUST00000083446 107 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm23851-201ENSMUST00000083831 103 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm26108-201ENSMUST00000083973 191 ntBASIC0.07□□□□□ -2.4
Tpm4Q6IRU2 Gm22469-201ENSMUST00000104118 133 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm22771-201ENSMUST00000104449 91 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm22215-201ENSMUST00000157558 96 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm24438-201ENSMUST00000157893 115 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm23113-201ENSMUST00000158477 99 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm25952-201ENSMUST00000175329 74 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm11392-201ENSMUST00000181419 710 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm27668-201ENSMUST00000184188 120 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm18291-201ENSMUST00000190791 301 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm25930-201ENSMUST00000082785 107 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm22505-201ENSMUST00000082956 108 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm22363-201ENSMUST00000083100 108 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Mir224-201ENSMUST00000083608 82 ntBASIC0.06□□□□□ -2.4
Tpm4Q6IRU2 Mir767-201ENSMUST00000103256 107 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Mir1951-201ENSMUST00000157981 89 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm22435-201ENSMUST00000158552 128 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm24880-201ENSMUST00000158776 85 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm18185-201ENSMUST00000186725 667 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm28597-201ENSMUST00000187664 666 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm44458-201ENSMUST00000196594 143 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm44052-201ENSMUST00000203382 396 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm45543-201ENSMUST00000209327 88 ntBASIC0.05□□□□□ -2.4
Tpm4Q6IRU2 Gm15289-201ENSMUST00000117793 244 ntBASIC0.04□□□□□ -2.4
Tpm4Q6IRU2 Gm26274-201ENSMUST00000157103 321 ntBASIC0.04□□□□□ -2.4
Tpm4Q6IRU2 Mir1933-201ENSMUST00000158930 88 ntBASIC0.04□□□□□ -2.4
Tpm4Q6IRU2 Gm23416-201ENSMUST00000175520 95 ntBASIC0.04□□□□□ -2.4
Tpm4Q6IRU2 Mir709-201ENSMUST00000102190 88 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm24375-201ENSMUST00000104397 132 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm24595-201ENSMUST00000122501 110 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm24440-201ENSMUST00000157236 63 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm23761-201ENSMUST00000158347 104 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm23759-201ENSMUST00000158351 268 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm24345-201ENSMUST00000158706 124 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm24512-201ENSMUST00000174963 65 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm26073-201ENSMUST00000179906 127 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm6105-201ENSMUST00000200580 624 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm43884-201ENSMUST00000204251 559 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm45402-201ENSMUST00000211796 223 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Gm22283-201ENSMUST00000082556 161 ntBASIC0.03□□□□□ -2.4
Tpm4Q6IRU2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Gm25781-201ENSMUST00000122527 84 ntBASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Gm37337-201ENSMUST00000192601 993 ntBASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Mir451a-201ENSMUST00000093557 72 ntBASIC0.02□□□□□ -2.41
Tpm4Q6IRU2 Snord69-201ENSMUST00000104024 80 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm13711-201ENSMUST00000119708 453 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm14392-201ENSMUST00000120332 401 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm25909-201ENSMUST00000157619 121 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm24853-201ENSMUST00000158026 121 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm22801-201ENSMUST00000175624 84 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm27410-201ENSMUST00000183851 115 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Gm25204-201ENSMUST00000082843 106 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Mir32-201ENSMUST00000083610 70 ntBASIC0.01□□□□□ -2.41
Tpm4Q6IRU2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm11386-201ENSMUST00000117761 347 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 n-R5s6-201ENSMUST00000122663 88 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm27540-201ENSMUST00000184950 187 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm44473-201ENSMUST00000204039 152 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm45119-201ENSMUST00000207612 199 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm44811-201ENSMUST00000209120 228 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 AC167192.2-201ENSMUST00000224794 198 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 Gm23625-201ENSMUST00000082457 100 ntBASIC0□□□□□ -2.41
Tpm4Q6IRU2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Tpm4Q6IRU2 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.01□□□□□ -2.41
Tpm4Q6IRU2 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms