Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm12924-201ENSMUST00000121747 318 ntBASIC1.51□□□□□ -2.17
Trim27Q62158 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.51□□□□□ -2.17
Trim27Q62158 Mir3061-201ENSMUST00000175129 91 ntBASIC1.51□□□□□ -2.17
Trim27Q62158 Gm27521-201ENSMUST00000184022 64 ntBASIC1.51□□□□□ -2.17
Trim27Q62158 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.51□□□□□ -2.17
Trim27Q62158 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
Trim27Q62158 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.51□□□□□ -2.17
Trim27Q62158 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim27Q62158 Gm23907-201ENSMUST00000104595 189 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm12449-201ENSMUST00000117572 234 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim27Q62158 Gm22485-201ENSMUST00000157990 109 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm22929-201ENSMUST00000175517 107 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim27Q62158 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm29603-201ENSMUST00000186792 334 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm6105-201ENSMUST00000200580 624 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Snord96a-201ENSMUST00000082791 81 ntBASIC1.5□□□□□ -2.17
Trim27Q62158 Gm26082-201ENSMUST00000104070 127 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Gm23536-201ENSMUST00000157541 134 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Mir5104-201ENSMUST00000175319 94 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Mir7039-201ENSMUST00000183852 85 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Gm45313-201ENSMUST00000210584 178 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Gm45616-201ENSMUST00000211711 319 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Gm9795-201ENSMUST00000062156 693 ntBASIC1.49□□□□□ -2.17
Trim27Q62158 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim27Q62158 Gm22984-201ENSMUST00000122751 122 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Mir8119-201ENSMUST00000183371 129 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Mir7665-201ENSMUST00000184907 63 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Gm44373-201ENSMUST00000196112 169 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Gm22306-201ENSMUST00000082692 107 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Gm22421-201ENSMUST00000083058 107 ntBASIC1.48□□□□□ -2.17
Trim27Q62158 Gm23705-201ENSMUST00000104370 130 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm25495-201ENSMUST00000104431 131 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm23182-201ENSMUST00000158688 135 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm2962-201ENSMUST00000159266 336 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Mir3968-201ENSMUST00000175355 100 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm22862-201ENSMUST00000178593 121 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm44325-201ENSMUST00000196757 77 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm24494-201ENSMUST00000083804 81 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm23039-201ENSMUST00000083870 161 ntBASIC1.47□□□□□ -2.17
Trim27Q62158 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trim27Q62158 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim27Q62158 Gm22785-201ENSMUST00000104087 132 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm25111-201ENSMUST00000116686 147 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm13560-201ENSMUST00000121865 329 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm24595-201ENSMUST00000122501 110 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm22228-201ENSMUST00000157364 101 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm23101-201ENSMUST00000157550 137 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Snord13-201ENSMUST00000157627 104 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Trim27Q62158 Mir3098-201ENSMUST00000175416 87 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm27894-201ENSMUST00000184177 92 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Trim27Q62158 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.46□□□□□ -2.18
Trim27Q62158 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trim27Q62158 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trim27Q62158 Gm23277-201ENSMUST00000157914 136 ntBASIC1.45□□□□□ -2.18
Trim27Q62158 Gm23571-201ENSMUST00000180073 127 ntBASIC1.45□□□□□ -2.18
Trim27Q62158 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.45□□□□□ -2.18
Trim27Q62158 Gm24453-201ENSMUST00000083346 76 ntBASIC1.45□□□□□ -2.18
Trim27Q62158 Gm25627-201ENSMUST00000084003 153 ntBASIC1.45□□□□□ -2.18
Trim27Q62158 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trim27Q62158 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trim27Q62158 Mir669o-201ENSMUST00000103898 96 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm22545-201ENSMUST00000104350 132 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm22673-201ENSMUST00000104415 131 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm23987-201ENSMUST00000117039 129 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm14923-201ENSMUST00000118270 155 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm22403-201ENSMUST00000174919 84 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm27711-201ENSMUST00000183802 118 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm21088-201ENSMUST00000190875 316 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trim27Q62158 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm24204-201ENSMUST00000082950 107 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Mir34a-201ENSMUST00000083559 102 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.44□□□□□ -2.18
Trim27Q62158 Gm11904-201ENSMUST00000120562 248 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm22477-201ENSMUST00000122569 316 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm26089-201ENSMUST00000157898 107 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trim27Q62158 Mir6962-201ENSMUST00000199512 63 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm44959-201ENSMUST00000209127 231 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm22980-201ENSMUST00000082608 70 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm25697-201ENSMUST00000082902 98 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm23245-201ENSMUST00000083370 135 ntBASIC1.43□□□□□ -2.18
Trim27Q62158 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trim27Q62158 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.42□□□□□ -2.18
Trim27Q62158 Gm25069-201ENSMUST00000175238 86 ntBASIC1.42□□□□□ -2.18
Trim27Q62158 Gm25615-201ENSMUST00000177836 94 ntBASIC1.42□□□□□ -2.18
Trim27Q62158 Gm16399-201ENSMUST00000181423 219 ntBASIC1.42□□□□□ -2.18
Trim27Q62158 Gm44483-201ENSMUST00000197203 97 ntBASIC1.42□□□□□ -2.18
Trim27Q62158 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms