Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm16032-201ENSMUST00000118534 168 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm15027-201ENSMUST00000120922 138 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ift88Q61371 Gm25914-201ENSMUST00000157618 153 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm24015-201ENSMUST00000157725 232 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Mir6379-201ENSMUST00000183392 115 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm43427-201ENSMUST00000198188 331 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm19855-201ENSMUST00000210145 249 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Gm25884-201ENSMUST00000157782 62 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Mir7050-201ENSMUST00000184636 60 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Gm2077-201ENSMUST00000195017 319 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ift88Q61371 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.04□□□□□ -2.08
Ift88Q61371 Gm24038-201ENSMUST00000082872 159 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Snora3-201ENSMUST00000083082 132 ntBASIC2.04□□□□□ -2.08
Ift88Q61371 Gm23656-201ENSMUST00000122626 112 ntBASIC2.03□□□□□ -2.08
Ift88Q61371 Gm23655-201ENSMUST00000122627 105 ntBASIC2.03□□□□□ -2.08
Ift88Q61371 Gm27285-201ENSMUST00000183875 127 ntBASIC2.03□□□□□ -2.08
Ift88Q61371 Gm37624-201ENSMUST00000193751 219 ntBASIC2.03□□□□□ -2.08
Ift88Q61371 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ift88Q61371 Gm36189-201ENSMUST00000204113 523 ntBASIC2.03□□□□□ -2.08
Ift88Q61371 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ift88Q61371 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ift88Q61371 Gm25267-201ENSMUST00000158522 63 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Snord87-201ENSMUST00000175437 87 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Mir3103-201ENSMUST00000175474 67 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Gm21064-202ENSMUST00000190583 278 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Gm37778-201ENSMUST00000191732 190 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.02□□□□□ -2.09
Ift88Q61371 Gm22973-201ENSMUST00000083298 191 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Gm24929-201ENSMUST00000083403 139 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.02□□□□□ -2.09
Ift88Q61371 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ift88Q61371 Gm24375-201ENSMUST00000104397 132 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Gm24750-201ENSMUST00000157843 104 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.01□□□□□ -2.09
Ift88Q61371 Gm27722-201ENSMUST00000183908 76 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Gm44326-201ENSMUST00000198226 101 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.01□□□□□ -2.09
Ift88Q61371 Gm18188-201ENSMUST00000219386 478 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Mir302d-201ENSMUST00000083513 66 ntBASIC2.01□□□□□ -2.09
Ift88Q61371 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ift88Q61371 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ift88Q61371 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ift88Q61371 Gm25538-201ENSMUST00000101943 107 ntBASIC2□□□□□ -2.09
Ift88Q61371 Gm26293-201ENSMUST00000104170 84 ntBASIC2□□□□□ -2.09
Ift88Q61371 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2□□□□□ -2.09
Ift88Q61371 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2□□□□□ -2.09
Ift88Q61371 Gm15692-201ENSMUST00000152173 352 ntBASIC2□□□□□ -2.09
Ift88Q61371 Gm25658-201ENSMUST00000158472 128 ntBASIC2□□□□□ -2.09
Ift88Q61371 Mir7683-201ENSMUST00000183842 61 ntBASIC2□□□□□ -2.09
Ift88Q61371 Mir7014-201ENSMUST00000183853 63 ntBASIC2□□□□□ -2.09
Ift88Q61371 Gm42719-201ENSMUST00000197393 355 ntBASIC2□□□□□ -2.09
Ift88Q61371 AC160863.1-201ENSMUST00000218412 317 ntBASIC2□□□□□ -2.09
Ift88Q61371 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ift88Q61371 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ift88Q61371 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.99□□□□□ -2.09
Ift88Q61371 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.99□□□□□ -2.09
Ift88Q61371 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ift88Q61371 Gm44325-201ENSMUST00000196757 77 ntBASIC1.99□□□□□ -2.09
Ift88Q61371 Mir721-201ENSMUST00000200230 88 ntBASIC1.99□□□□□ -2.09
Ift88Q61371 Mir222-201ENSMUST00000083537 79 ntBASIC1.99□□□□□ -2.09
Ift88Q61371 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm23718-201ENSMUST00000157350 307 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm23113-201ENSMUST00000158477 99 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm24572-201ENSMUST00000175505 88 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm23963-201ENSMUST00000179603 77 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Mir6995-201ENSMUST00000183658 71 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm45013-201ENSMUST00000206883 178 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ift88Q61371 Gm24261-201ENSMUST00000083744 104 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Gm25627-201ENSMUST00000084003 153 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ift88Q61371 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.98□□□□□ -2.09
Ift88Q61371 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Ift88Q61371 Gm23209-201ENSMUST00000158667 110 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Mir6419-201ENSMUST00000184784 113 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.97□□□□□ -2.09
Ift88Q61371 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Gm22686-201ENSMUST00000082847 100 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.97□□□□□ -2.09
Ift88Q61371 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Ift88Q61371 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.96□□□□□ -2.1
Ift88Q61371 Mir7021-201ENSMUST00000197026 63 ntBASIC1.96□□□□□ -2.1
Ift88Q61371 Gm44057-201ENSMUST00000204547 96 ntBASIC1.96□□□□□ -2.1
Ift88Q61371 Gm15281-201ENSMUST00000125181 351 ntBASIC1.95□□□□□ -2.1
Ift88Q61371 Gm22337-201ENSMUST00000157721 132 ntBASIC1.95□□□□□ -2.1
Ift88Q61371 Gm22989-201ENSMUST00000158313 86 ntBASIC1.95□□□□□ -2.1
Ift88Q61371 Gm24358-201ENSMUST00000158424 288 ntBASIC1.95□□□□□ -2.1
Ift88Q61371 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.95□□□□□ -2.1
Ift88Q61371 Gm25464-201ENSMUST00000175481 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms