Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.16□□□□□ -2.06
CtcfQ61164 Snord80-202ENSMUST00000199023 77 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CtcfQ61164 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.15□□□□□ -2.06
CtcfQ61164 Mir344e-201ENSMUST00000104677 66 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm12449-201ENSMUST00000117572 234 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm25985-201ENSMUST00000122677 107 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm22381-201ENSMUST00000158186 107 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm6003-201ENSMUST00000187903 463 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm37918-201ENSMUST00000192071 120 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Mir3087-201ENSMUST00000199405 56 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm45116-201ENSMUST00000207392 275 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm26454-201ENSMUST00000082682 107 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Mir429-201ENSMUST00000083493 83 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Mir151-201ENSMUST00000083678 68 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm25895-201ENSMUST00000083714 100 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm23347-201ENSMUST00000083823 82 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.15□□□□□ -2.07
CtcfQ61164 Gm23010-201ENSMUST00000104151 126 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CtcfQ61164 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm22281-201ENSMUST00000157198 103 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm25716-201ENSMUST00000158628 104 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm23182-201ENSMUST00000158688 135 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm24676-201ENSMUST00000158758 75 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm23813-201ENSMUST00000175153 77 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Mir7016-201ENSMUST00000184308 72 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Gm22248-201ENSMUST00000082482 150 ntBASIC2.14□□□□□ -2.07
CtcfQ61164 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CtcfQ61164 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CtcfQ61164 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CtcfQ61164 Mir374b-201ENSMUST00000102314 95 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm25496-201ENSMUST00000104430 120 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm22193-201ENSMUST00000116868 76 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm13433-201ENSMUST00000121701 240 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm22731-201ENSMUST00000158086 94 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm22075-201ENSMUST00000158599 192 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm24333-201ENSMUST00000175101 84 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm24167-201ENSMUST00000177733 124 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm24028-201ENSMUST00000178991 124 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm22510-201ENSMUST00000179304 79 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm26336-201ENSMUST00000179449 79 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm26390-201ENSMUST00000179628 79 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm27443-201ENSMUST00000184660 98 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm42834-201ENSMUST00000196845 256 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.13□□□□□ -2.07
CtcfQ61164 Mir3961-201ENSMUST00000198795 59 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm24625-201ENSMUST00000082622 130 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm22683-201ENSMUST00000082854 137 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.13□□□□□ -2.07
CtcfQ61164 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
CtcfQ61164 Gm26022-201ENSMUST00000158663 108 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm23181-201ENSMUST00000158685 110 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm26004-201ENSMUST00000158804 116 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CtcfQ61164 Gm43512-201ENSMUST00000198495 176 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm44859-201ENSMUST00000207831 94 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm22421-201ENSMUST00000083058 107 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm24453-201ENSMUST00000083346 76 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Mir301-201ENSMUST00000083655 86 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CtcfQ61164 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CtcfQ61164 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.12□□□□□ -2.07
CtcfQ61164 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CtcfQ61164 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm25068-201ENSMUST00000103895 110 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Mir1949-201ENSMUST00000157434 141 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm26405-201ENSMUST00000158495 100 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm43587-201ENSMUST00000199590 204 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm25142-201ENSMUST00000082698 107 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm25204-201ENSMUST00000082843 106 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.11□□□□□ -2.07
CtcfQ61164 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 BC022960-201ENSMUST00000119987 1815 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CtcfQ61164 Gm13801-201ENSMUST00000120750 160 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm14491-201ENSMUST00000121919 199 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm23983-201ENSMUST00000157142 114 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm24478-201ENSMUST00000157439 158 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm26345-201ENSMUST00000157534 120 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm23101-201ENSMUST00000157550 137 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm22606-201ENSMUST00000158290 103 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm22768-201ENSMUST00000158366 153 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm16162-201ENSMUST00000162296 297 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Mir3086-201ENSMUST00000175072 87 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm23267-201ENSMUST00000178490 132 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm44922-201ENSMUST00000206690 90 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.1□□□□□ -2.07
CtcfQ61164 Gm26493-201ENSMUST00000083155 136 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms