Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm37313-201ENSMUST00000191673 290 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm37763-201ENSMUST00000193445 120 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Mir465d-201ENSMUST00000196314 58 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Mir3535-201ENSMUST00000197651 147 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm44419-201ENSMUST00000203338 229 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm22980-201ENSMUST00000082608 70 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm26111-201ENSMUST00000083969 106 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm26107-201ENSMUST00000083972 107 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm26074-201ENSMUST00000104063 129 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Gm15379-201ENSMUST00000121224 648 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Gm24440-201ENSMUST00000157236 63 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Gm24847-201ENSMUST00000158032 108 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Gm24512-201ENSMUST00000174963 65 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Gm42855-201ENSMUST00000197388 253 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.98□□□□□ -2.25
Usf1Q61069 Mir6381-201ENSMUST00000183426 87 ntBASIC0.97□□□□□ -2.25
Usf1Q61069 Gm28925-201ENSMUST00000188586 168 ntBASIC0.97□□□□□ -2.25
Usf1Q61069 Gm29014-201ENSMUST00000191422 326 ntBASIC0.97□□□□□ -2.25
Usf1Q61069 Gm43884-201ENSMUST00000204251 559 ntBASIC0.97□□□□□ -2.25
Usf1Q61069 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.97□□□□□ -2.25
Usf1Q61069 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.97□□□□□ -2.25
Usf1Q61069 Gm23492-201ENSMUST00000116837 115 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm22032-201ENSMUST00000116946 116 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm25663-201ENSMUST00000157698 135 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm22485-201ENSMUST00000157990 109 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm25166-201ENSMUST00000158909 111 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm27640-201ENSMUST00000184580 147 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.96□□□□□ -2.26
Usf1Q61069 Gm25204-201ENSMUST00000082843 106 ntBASIC0.96□□□□□ -2.26
Usf1Q61069 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Usf1Q61069 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm11334-201ENSMUST00000121969 156 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm25825-201ENSMUST00000157091 124 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm22814-201ENSMUST00000157452 104 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm23106-201ENSMUST00000157554 101 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Mir1951-201ENSMUST00000157981 89 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm26022-201ENSMUST00000158663 108 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm28330-201ENSMUST00000190353 171 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm22248-201ENSMUST00000082482 150 ntBASIC0.95□□□□□ -2.26
Usf1Q61069 Gm25416-201ENSMUST00000104221 107 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm11794-201ENSMUST00000119446 237 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm24629-201ENSMUST00000122762 89 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.94□□□□□ -2.26
Usf1Q61069 Gm24808-201ENSMUST00000157993 118 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm25901-201ENSMUST00000158494 130 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm25750-201ENSMUST00000175483 112 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm28849-201ENSMUST00000188127 174 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm43199-201ENSMUST00000200019 307 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm29818-201ENSMUST00000218070 165 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm26224-201ENSMUST00000082506 80 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm24042-201ENSMUST00000083114 103 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm25128-201ENSMUST00000083339 76 ntBASIC0.94□□□□□ -2.26
Usf1Q61069 Gm15002-201ENSMUST00000118406 452 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm16032-201ENSMUST00000118534 168 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Usf1Q61069 Gm22080-201ENSMUST00000157591 106 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm23542-201ENSMUST00000158208 96 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm26213-201ENSMUST00000158582 110 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm24737-201ENSMUST00000158861 100 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm26363-201ENSMUST00000158866 83 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm23008-201ENSMUST00000158946 80 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.93□□□□□ -2.26
Usf1Q61069 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.93□□□□□ -2.26
Usf1Q61069 Gm44352-201ENSMUST00000196358 110 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm25697-201ENSMUST00000082902 98 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm22884-201ENSMUST00000083127 140 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Mir22-201ENSMUST00000083595 95 ntBASIC0.93□□□□□ -2.26
Usf1Q61069 Gm24275-201ENSMUST00000116780 146 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm11792-201ENSMUST00000120640 168 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm22233-201ENSMUST00000157464 114 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm25868-201ENSMUST00000158253 114 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm27419-201ENSMUST00000184576 109 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.92□□□□□ -2.26
Usf1Q61069 Gm23299-201ENSMUST00000082708 79 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm25793-201ENSMUST00000083287 107 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Gm25627-201ENSMUST00000084003 153 ntBASIC0.92□□□□□ -2.26
Usf1Q61069 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Usf1Q61069 Gm24288-201ENSMUST00000157630 144 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm24777-201ENSMUST00000157644 107 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm26089-201ENSMUST00000157898 107 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm23898-201ENSMUST00000158111 103 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm23182-201ENSMUST00000158688 135 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Mir7091-201ENSMUST00000184075 79 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm29022-201ENSMUST00000190702 225 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Gm25079-201ENSMUST00000082529 203 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Snora41-201ENSMUST00000082668 132 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Mir490-201ENSMUST00000093567 84 ntBASIC0.91□□□□□ -2.26
Usf1Q61069 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.9□□□□□ -2.27
Usf1Q61069 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms