Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm23191-201ENSMUST00000179147 107 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm37918-201ENSMUST00000192071 120 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm45403-201ENSMUST00000209453 276 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm9795-201ENSMUST00000062156 693 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Mir767-201ENSMUST00000103256 107 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm26393-201ENSMUST00000157625 129 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm25885-201ENSMUST00000157779 109 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24401-201ENSMUST00000157868 91 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24523-201ENSMUST00000083965 132 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm26329-201ENSMUST00000093723 110 ntBASIC0.56□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm13560-201ENSMUST00000121865 329 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm23898-201ENSMUST00000158111 103 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm23020-201ENSMUST00000158766 253 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm25750-201ENSMUST00000175483 112 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22887-201ENSMUST00000178586 107 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.55□□□□□ -2.32
Ccdc88aQ5SNZ0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm11794-201ENSMUST00000119446 237 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22088-201ENSMUST00000158341 117 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm23114-201ENSMUST00000158478 117 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm23627-201ENSMUST00000082459 107 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22502-201ENSMUST00000082488 107 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22977-201ENSMUST00000082615 107 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24149-201ENSMUST00000082757 107 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22743-201ENSMUST00000083445 133 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Mir6904-201ENSMUST00000183443 67 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Snord42a-201ENSMUST00000082606 65 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.54□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm26474-201ENSMUST00000116762 122 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm16032-201ENSMUST00000118534 168 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm14782-201ENSMUST00000120151 195 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm25781-201ENSMUST00000122527 84 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm24020-201ENSMUST00000180156 108 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm28408-201ENSMUST00000191557 463 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Mir7661-201ENSMUST00000197023 61 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm34783-201ENSMUST00000209159 303 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm45543-201ENSMUST00000209327 88 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22294-201ENSMUST00000083308 104 ntBASIC0.53□□□□□ -2.32
Ccdc88aQ5SNZ0 Gm22113-201ENSMUST00000158343 104 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm26968-201ENSMUST00000182894 481 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm29013-201ENSMUST00000187431 237 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm18213-201ENSMUST00000207850 178 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm24494-201ENSMUST00000083804 81 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm24163-201ENSMUST00000093660 132 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm22021-201ENSMUST00000104353 107 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm7958-201ENSMUST00000178255 468 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm7950-201ENSMUST00000179633 468 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm22248-201ENSMUST00000082482 150 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm23412-201ENSMUST00000083017 107 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Mir490-201ENSMUST00000093567 84 ntBASIC0.52□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm22656-201ENSMUST00000104199 171 ntBASIC0.51□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm23022-201ENSMUST00000158768 180 ntBASIC0.51□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm28661-201ENSMUST00000188231 681 ntBASIC0.51□□□□□ -2.33
Ccdc88aQ5SNZ0 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.51□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm12770-201ENSMUST00000121734 462 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm29022-201ENSMUST00000190702 225 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm26056-201ENSMUST00000083043 104 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm25578-201ENSMUST00000083406 104 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm23749-201ENSMUST00000104223 131 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm12647-201ENSMUST00000118977 265 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm37763-201ENSMUST00000193445 120 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm42719-201ENSMUST00000197393 355 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Mir155-201ENSMUST00000083463 65 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Mir32-201ENSMUST00000083610 70 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm25627-201ENSMUST00000084003 153 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.5□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc88aQ5SNZ0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms