Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Mir880-201ENSMUST00000104809 78 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm25970-201ENSMUST00000157165 86 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm24504-201ENSMUST00000157679 100 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm24847-201ENSMUST00000158032 108 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm43406-201ENSMUST00000200356 334 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Gm44149-201ENSMUST00000204256 226 ntBASIC0.71□□□□□ -2.3
Clhc1Q5M6W3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Mir654-201ENSMUST00000104787 84 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm13560-201ENSMUST00000121865 329 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm25783-201ENSMUST00000122525 190 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm25450-201ENSMUST00000179144 107 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm38050-201ENSMUST00000191904 238 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm42622-201ENSMUST00000197229 355 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm6105-201ENSMUST00000200580 624 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm22248-201ENSMUST00000082482 150 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Gm25929-201ENSMUST00000082784 107 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.7□□□□□ -2.3
Clhc1Q5M6W3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm26301-201ENSMUST00000104813 95 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm11835-201ENSMUST00000120635 663 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm20391-201ENSMUST00000174722 106 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm25949-201ENSMUST00000175333 114 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Mir1954-201ENSMUST00000175595 86 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm28330-201ENSMUST00000190353 171 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm25930-201ENSMUST00000082785 107 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm24042-201ENSMUST00000083114 103 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Mir324-201ENSMUST00000083600 89 ntBASIC0.69□□□□□ -2.3
Clhc1Q5M6W3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm13518-201ENSMUST00000120018 233 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm25781-201ENSMUST00000122527 84 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm14298-201ENSMUST00000139032 237 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm16356-201ENSMUST00000143300 169 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm23793-201ENSMUST00000179396 117 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Mir465d-201ENSMUST00000196314 58 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm26379-202ENSMUST00000200225 132 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm34783-201ENSMUST00000209159 303 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm23039-201ENSMUST00000083870 161 ntBASIC0.68□□□□□ -2.3
Clhc1Q5M6W3 Gm13711-201ENSMUST00000119708 453 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm24595-201ENSMUST00000122501 110 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm24630-201ENSMUST00000122768 106 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm23665-201ENSMUST00000158054 62 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Mir1961-201ENSMUST00000158643 112 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm23182-201ENSMUST00000158688 135 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm23194-201ENSMUST00000158813 105 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm25838-201ENSMUST00000158920 120 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm22914-201ENSMUST00000175195 77 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm27656-201ENSMUST00000185055 80 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm28489-201ENSMUST00000186655 316 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm24043-201ENSMUST00000083108 116 ntBASIC0.67□□□□□ -2.3
Clhc1Q5M6W3 Gm22200-201ENSMUST00000158614 67 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Gm37338-201ENSMUST00000191986 127 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Gm44352-201ENSMUST00000196358 110 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Mir376a-201ENSMUST00000197584 68 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Mir410-201ENSMUST00000083563 81 ntBASIC0.66□□□□□ -2.3
Clhc1Q5M6W3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Clhc1Q5M6W3 Gm23262-201ENSMUST00000158323 168 ntBASIC0.65□□□□□ -2.31
Clhc1Q5M6W3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Clhc1Q5M6W3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.65□□□□□ -2.31
Clhc1Q5M6W3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm12647-201ENSMUST00000118977 265 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm24498-201ENSMUST00000158445 102 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm23474-201ENSMUST00000158884 75 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm28927-201ENSMUST00000191528 272 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Mir3535-201ENSMUST00000197651 147 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Snord33-201ENSMUST00000083694 84 ntBASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
Clhc1Q5M6W3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.63□□□□□ -2.31
Clhc1Q5M6W3 Gm25982-201ENSMUST00000157920 101 ntBASIC0.63□□□□□ -2.31
Clhc1Q5M6W3 Gm23779-201ENSMUST00000157938 64 ntBASIC0.63□□□□□ -2.31
Clhc1Q5M6W3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms