Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm25875-201ENSMUST00000104323 107 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm24777-201ENSMUST00000157644 107 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm23579-201ENSMUST00000158528 103 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm23339-201ENSMUST00000158962 139 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm20923-201ENSMUST00000190009 319 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm21088-201ENSMUST00000190875 316 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm29014-201ENSMUST00000191422 326 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm42855-201ENSMUST00000197388 253 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm44055-201ENSMUST00000204376 247 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm9795-201ENSMUST00000062156 693 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm22571-201ENSMUST00000082984 70 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm26497-201ENSMUST00000083146 107 ntBASIC1.11□□□□□ -2.23
Usp28Q5I043 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Usp28Q5I043 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 BC022960-201ENSMUST00000119987 1815 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Usp28Q5I043 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm11792-201ENSMUST00000120640 168 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm15214-201ENSMUST00000122155 470 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm22321-201ENSMUST00000157152 104 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm44325-201ENSMUST00000196757 77 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Gm25636-201ENSMUST00000082666 133 ntBASIC1.1□□□□□ -2.23
Usp28Q5I043 Mir544-201ENSMUST00000103813 78 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Gm24595-201ENSMUST00000122501 110 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Mir8119-201ENSMUST00000183371 129 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Mir3087-201ENSMUST00000199405 56 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Gm6105-201ENSMUST00000200580 624 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 Gm45313-201ENSMUST00000210584 178 ntBASIC1.09□□□□□ -2.23
Usp28Q5I043 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.09□□□□□ -2.23
Usp28Q5I043 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Usp28Q5I043 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Usp28Q5I043 Mir875-201ENSMUST00000104698 78 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Gm11322-201ENSMUST00000118095 435 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Gm22074-201ENSMUST00000158595 113 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Mir7091-201ENSMUST00000184075 79 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Gm43563-201ENSMUST00000196761 198 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.08□□□□□ -2.24
Usp28Q5I043 Gm44959-201ENSMUST00000209127 231 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.08□□□□□ -2.24
Usp28Q5I043 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Usp28Q5I043 Mir343-201ENSMUST00000102360 75 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm23705-201ENSMUST00000104370 130 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm12837-201ENSMUST00000120131 373 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm11904-201ENSMUST00000120562 248 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Mir1967-201ENSMUST00000157789 82 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm23277-201ENSMUST00000157914 136 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm22097-201ENSMUST00000157929 278 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm26402-201ENSMUST00000158499 113 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Traj60-201ENSMUST00000167781 54 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm25615-201ENSMUST00000177836 94 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm27905-201ENSMUST00000184005 207 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.07□□□□□ -2.24
Usp28Q5I043 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm25038-201ENSMUST00000082928 130 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.07□□□□□ -2.24
Usp28Q5I043 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.07□□□□□ -2.24
Usp28Q5I043 Gm22545-201ENSMUST00000104350 132 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm14846-201ENSMUST00000121868 216 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm25825-201ENSMUST00000157091 124 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm24915-201ENSMUST00000157288 78 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm23101-201ENSMUST00000157550 137 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm26004-201ENSMUST00000158804 116 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm22118-201ENSMUST00000175593 171 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Mir3970-201ENSMUST00000199287 90 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm26379-202ENSMUST00000200225 132 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm19572-201ENSMUST00000214326 338 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.06□□□□□ -2.24
Usp28Q5I043 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm25697-201ENSMUST00000082902 98 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm22421-201ENSMUST00000083058 107 ntBASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Usp28Q5I043 Gm14536-201ENSMUST00000118324 138 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm15027-201ENSMUST00000120922 138 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm15379-201ENSMUST00000121224 648 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm25664-201ENSMUST00000157697 107 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm22450-201ENSMUST00000179641 107 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm25473-201ENSMUST00000180191 107 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm27747-201ENSMUST00000184707 85 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm28921-201ENSMUST00000190219 378 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.05□□□□□ -2.24
Usp28Q5I043 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm24856-201ENSMUST00000082809 107 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm26071-201ENSMUST00000083261 107 ntBASIC1.05□□□□□ -2.24
Usp28Q5I043 Gm24521-201ENSMUST00000083958 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 208 ms