Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Gm10297-201ENSMUST00000207136 651 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Mir880-201ENSMUST00000104809 78 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Gm14298-201ENSMUST00000139032 237 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Mir1949-202ENSMUST00000199259 70 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Gm25126-201ENSMUST00000083343 102 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Gm16307-201ENSMUST00000161269 210 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 AC140477.1-201ENSMUST00000222354 246 ntBASIC-1.5□□□□□ -2.65
Ccdc88bQ4QRL3 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm28740-201ENSMUST00000186142 215 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm22283-201ENSMUST00000082556 161 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm23055-201ENSMUST00000082805 94 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm24164-201ENSMUST00000093663 104 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.51□□□□□ -2.65
Ccdc88bQ4QRL3 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Gm23898-201ENSMUST00000158111 103 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Gm37116-201ENSMUST00000195161 147 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Mir7661-201ENSMUST00000197023 61 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Mir363-201ENSMUST00000093598 75 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Gm23741-201ENSMUST00000097237 171 ntBASIC-1.52□□□□□ -2.65
Ccdc88bQ4QRL3 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 Gm21726-201ENSMUST00000179654 392 ntBASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 Gm44352-201ENSMUST00000196358 110 ntBASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.53□□□□□ -2.65
Ccdc88bQ4QRL3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 Gm29535-201ENSMUST00000185723 109 ntBASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 Gm28143-201ENSMUST00000191082 109 ntBASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 Gm19901-201ENSMUST00000192191 495 ntBASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 AC117656.1-201ENSMUST00000225826 339 ntBASIC-1.54□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25213-201ENSMUST00000102388 113 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm26249-201ENSMUST00000116708 118 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25323-201ENSMUST00000122555 103 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25494-201ENSMUST00000158143 100 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25241-201ENSMUST00000174909 84 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.55□□□□□ -2.66
Ccdc88bQ4QRL3 Gm14671-201ENSMUST00000121790 262 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm23375-201ENSMUST00000175407 83 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm24415-201ENSMUST00000180218 107 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Mir6390-201ENSMUST00000184405 129 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Mir687-201ENSMUST00000102166 89 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm22776-201ENSMUST00000178634 94 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Gm23767-201ENSMUST00000179278 94 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.56□□□□□ -2.66
Ccdc88bQ4QRL3 Mir804-201ENSMUST00000103251 95 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm23584-201ENSMUST00000157655 129 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm24728-201ENSMUST00000158226 125 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm36953-201ENSMUST00000195295 268 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Mir677-202ENSMUST00000197076 78 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 AC100209.2-201ENSMUST00000224461 451 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25897-201ENSMUST00000083709 107 ntBASIC-1.57□□□□□ -2.66
Ccdc88bQ4QRL3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25878-201ENSMUST00000104327 93 ntBASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25269-201ENSMUST00000122601 104 ntBASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm23169-201ENSMUST00000157157 112 ntBASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm27993-201ENSMUST00000184362 85 ntBASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-1.58□□□□□ -2.66
Ccdc88bQ4QRL3 Gm22935-201ENSMUST00000103960 104 ntBASIC-1.59□□□□□ -2.66
Ccdc88bQ4QRL3 Gm13065-201ENSMUST00000119178 141 ntBASIC-1.59□□□□□ -2.66
Ccdc88bQ4QRL3 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.59□□□□□ -2.66
Ccdc88bQ4QRL3 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.59□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25513-201ENSMUST00000083861 162 ntBASIC-1.59□□□□□ -2.66
Ccdc88bQ4QRL3 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22541-201ENSMUST00000158165 127 ntBASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm36189-201ENSMUST00000204113 523 ntBASIC-1.6□□□□□ -2.67
Ccdc88bQ4QRL3 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.61□□□□□ -2.67
Ccdc88bQ4QRL3 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.61□□□□□ -2.67
Ccdc88bQ4QRL3 Gm26073-201ENSMUST00000179906 127 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms