Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm29818-201ENSMUST00000218070 165 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm25079-201ENSMUST00000082529 203 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm24316-201ENSMUST00000083041 107 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm25318-201ENSMUST00000122554 314 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Mir1967-201ENSMUST00000157789 82 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm17919-201ENSMUST00000173344 312 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm28008-201ENSMUST00000184021 186 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm37801-201ENSMUST00000194754 274 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Mir10b-201ENSMUST00000083566 68 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Mir200b-201ENSMUST00000083615 70 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Gm23845-201ENSMUST00000083834 152 ntBASIC1.09□□□□□ -2.23
Upf3aQ3ULJ3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.09□□□□□ -2.24
Upf3aQ3ULJ3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Mir767-201ENSMUST00000103256 107 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm23836-201ENSMUST00000104434 129 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm25848-201ENSMUST00000116790 144 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm12924-201ENSMUST00000121747 318 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm25884-201ENSMUST00000157782 62 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm24501-201ENSMUST00000158452 62 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm28409-201ENSMUST00000187064 103 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm37763-201ENSMUST00000193445 120 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm37089-201ENSMUST00000195616 129 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm43199-201ENSMUST00000200019 307 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Gm23055-201ENSMUST00000082805 94 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.08□□□□□ -2.24
Upf3aQ3ULJ3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm23492-201ENSMUST00000116837 115 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm24440-201ENSMUST00000157236 63 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm24512-201ENSMUST00000174963 65 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm28330-201ENSMUST00000190353 171 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Mir465d-201ENSMUST00000196314 58 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm7240-201ENSMUST00000220769 664 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm24038-201ENSMUST00000082872 159 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm25793-201ENSMUST00000083287 107 ntBASIC1.07□□□□□ -2.24
Upf3aQ3ULJ3 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm13339-201ENSMUST00000120651 510 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm13725-201ENSMUST00000122139 207 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm24847-201ENSMUST00000158032 108 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm2962-201ENSMUST00000159266 336 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm42719-201ENSMUST00000197393 355 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm24042-201ENSMUST00000083114 103 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm24261-201ENSMUST00000083744 104 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.06□□□□□ -2.24
Upf3aQ3ULJ3 Mir544-201ENSMUST00000103813 78 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm26074-201ENSMUST00000104063 129 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm14922-201ENSMUST00000121131 163 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm14491-201ENSMUST00000121919 199 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm27723-201ENSMUST00000157398 63 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm26022-201ENSMUST00000158663 108 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm22242-201ENSMUST00000175224 118 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Mir6951-201ENSMUST00000183910 75 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm28016-201ENSMUST00000184594 196 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm28579-201ENSMUST00000186143 369 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm19777-201ENSMUST00000191940 358 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm44352-201ENSMUST00000196358 110 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.05□□□□□ -2.24
Upf3aQ3ULJ3 Gm22785-201ENSMUST00000104087 132 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm12449-201ENSMUST00000117572 234 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm22434-201ENSMUST00000158549 122 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Mir6540-201ENSMUST00000184886 108 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm34015-201ENSMUST00000194908 451 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Mir7227-201ENSMUST00000200408 59 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm45616-201ENSMUST00000211711 319 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Gm25204-201ENSMUST00000082843 106 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Snord1a-201ENSMUST00000083160 74 ntBASIC1.04□□□□□ -2.24
Upf3aQ3ULJ3 Mir1951-201ENSMUST00000157981 89 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm23419-201ENSMUST00000175523 84 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm28849-201ENSMUST00000188127 174 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm28661-201ENSMUST00000188231 681 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm45005-201ENSMUST00000206640 157 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Upf3aQ3ULJ3 Gm25128-201ENSMUST00000083339 76 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms