Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm15067-201ENSMUST00000119534 156 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm23640-201ENSMUST00000157860 104 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm24222-201ENSMUST00000158834 93 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Traj60-201ENSMUST00000167781 54 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir5624-201ENSMUST00000176635 61 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm7654-201ENSMUST00000186738 683 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir465d-201ENSMUST00000196314 58 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm44491-201ENSMUST00000196794 96 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm45754-201ENSMUST00000212380 279 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm5010-201ENSMUST00000213131 260 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm10092-201ENSMUST00000077110 180 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm26056-201ENSMUST00000083043 104 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir340-201ENSMUST00000083483 98 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm26339-201ENSMUST00000102368 99 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm24865-201ENSMUST00000103246 96 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm22321-201ENSMUST00000157152 104 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir1949-201ENSMUST00000157434 141 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm25333-201ENSMUST00000158035 246 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm23208-201ENSMUST00000158666 127 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm22114-201ENSMUST00000177756 107 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir7093-201ENSMUST00000184195 101 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm43624-201ENSMUST00000197368 180 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Mir3961-201ENSMUST00000198795 59 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Gm43367-201ENSMUST00000199986 625 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.7□□□□□ -2.3
Spg11Q3UHA3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm24116-201ENSMUST00000103975 107 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm24191-201ENSMUST00000157977 122 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm23759-201ENSMUST00000158351 268 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm26363-201ENSMUST00000158866 83 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm43602-201ENSMUST00000196772 300 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm22358-201ENSMUST00000082877 122 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm25188-201ENSMUST00000083913 122 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Mir544-201ENSMUST00000103813 78 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm22315-201ENSMUST00000158010 143 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm22075-201ENSMUST00000158599 192 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm25718-201ENSMUST00000158632 118 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm26400-201ENSMUST00000175012 85 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm24805-201ENSMUST00000082931 104 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm25512-201ENSMUST00000083863 107 ntBASIC0.69□□□□□ -2.3
Spg11Q3UHA3 Gm26255-201ENSMUST00000122492 103 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm24499-201ENSMUST00000158446 104 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm17052-201ENSMUST00000165496 289 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm25949-201ENSMUST00000175333 114 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Mir195b-201ENSMUST00000184814 97 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm45543-201ENSMUST00000209327 88 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm45403-201ENSMUST00000209453 276 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm24765-201ENSMUST00000083691 103 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm22097-201ENSMUST00000157929 278 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm22163-201ENSMUST00000158408 135 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm26180-201ENSMUST00000179942 107 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Mir6380-201ENSMUST00000184334 81 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm28661-201ENSMUST00000188231 681 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm35736-201ENSMUST00000203681 313 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.68□□□□□ -2.3
Spg11Q3UHA3 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm25135-201ENSMUST00000082648 143 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm23451-201ENSMUST00000083328 122 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm26164-201ENSMUST00000083793 104 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm26107-201ENSMUST00000083972 107 ntBASIC0.68□□□□□ -2.3
Spg11Q3UHA3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm22085-201ENSMUST00000158344 110 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm22242-201ENSMUST00000175224 118 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm38050-201ENSMUST00000191904 238 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm37918-201ENSMUST00000192071 120 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm24355-201ENSMUST00000082858 122 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm25578-201ENSMUST00000083406 104 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm25423-201ENSMUST00000157609 107 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm23024-201ENSMUST00000158770 292 ntBASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Spg11Q3UHA3 Gm37089-201ENSMUST00000195616 129 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms