Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm27421-201ENSMUST00000184729 167 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm29022-201ENSMUST00000190702 225 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm24423-201ENSMUST00000101982 106 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm24379-201ENSMUST00000122695 86 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm22279-201ENSMUST00000157200 93 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm25362-201ENSMUST00000158854 105 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm25235-201ENSMUST00000179933 107 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm37089-201ENSMUST00000195616 129 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm6105-201ENSMUST00000200580 624 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm22248-201ENSMUST00000082482 150 ntBASIC1.33□□□□□ -2.2
Trafd1Q3UDK1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm15214-201ENSMUST00000122155 470 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm26049-201ENSMUST00000157313 108 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm25653-201ENSMUST00000158473 138 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm29603-201ENSMUST00000186792 334 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Mir221-201ENSMUST00000083488 95 ntBASIC1.32□□□□□ -2.2
Trafd1Q3UDK1 Gm24590-201ENSMUST00000116699 119 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm25315-201ENSMUST00000116823 121 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm6025-201ENSMUST00000121517 201 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm22228-201ENSMUST00000157364 101 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm9251-201ENSMUST00000197202 628 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm44977-201ENSMUST00000205283 420 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm19855-201ENSMUST00000210145 249 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm45859-201ENSMUST00000212794 214 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Snora19-201ENSMUST00000082962 132 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm23658-201ENSMUST00000083233 132 ntBASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trafd1Q3UDK1 Gm14846-201ENSMUST00000121868 216 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm24595-201ENSMUST00000122501 110 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Mir1898-201ENSMUST00000122643 83 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm25884-201ENSMUST00000157782 62 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm23208-201ENSMUST00000158666 127 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm28724-201ENSMUST00000186149 625 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm25141-201ENSMUST00000083177 107 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.3□□□□□ -2.2
Trafd1Q3UDK1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Mir293-201ENSMUST00000104841 80 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm23101-201ENSMUST00000157550 137 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Snord13-201ENSMUST00000157627 104 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm22675-201ENSMUST00000158430 104 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm2962-201ENSMUST00000159266 336 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm23977-201ENSMUST00000177871 74 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm23002-201ENSMUST00000179221 107 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm29308-201ENSMUST00000188863 315 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm44563-201ENSMUST00000207958 178 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Gm22421-201ENSMUST00000083058 107 ntBASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trafd1Q3UDK1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Gm23705-201ENSMUST00000104370 130 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Mir881-201ENSMUST00000104844 78 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Mir669g-201ENSMUST00000116809 123 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Gm26482-201ENSMUST00000158015 62 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Gm45116-201ENSMUST00000207392 275 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.28□□□□□ -2.2
Trafd1Q3UDK1 BC022960-201ENSMUST00000119987 1815 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm23219-201ENSMUST00000158123 87 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm24366-201ENSMUST00000175383 86 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm22951-201ENSMUST00000179471 107 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm44409-201ENSMUST00000198810 166 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.27□□□□□ -2.21
Trafd1Q3UDK1 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Mir343-201ENSMUST00000102360 75 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.26□□□□□ -2.21
Trafd1Q3UDK1 Gm13560-201ENSMUST00000121865 329 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms