Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm26494-201ENSMUST00000083154 143 ntBASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Gm24493-201ENSMUST00000083805 143 ntBASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Mir127-201ENSMUST00000093568 70 ntBASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Usp39Q3TIX9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Usp39Q3TIX9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm24747-201ENSMUST00000157835 87 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm22212-201ENSMUST00000158096 106 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm27934-201ENSMUST00000158795 63 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Mir5118-201ENSMUST00000175551 67 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm20613-201ENSMUST00000175828 345 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm38364-201ENSMUST00000191814 179 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Usp39Q3TIX9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.4□□□□□ -2.02
Usp39Q3TIX9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm26091-201ENSMUST00000122704 82 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm23324-201ENSMUST00000157421 131 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm22946-201ENSMUST00000158558 82 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm24634-201ENSMUST00000158672 107 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Mir6353-201ENSMUST00000183596 113 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm44976-201ENSMUST00000205543 261 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm24977-201ENSMUST00000083106 163 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm22972-201ENSMUST00000083297 131 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Mir201-201ENSMUST00000083470 66 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.4□□□□□ -2.03
Usp39Q3TIX9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm26342-201ENSMUST00000104557 129 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm25828-201ENSMUST00000157087 95 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Mir7039-201ENSMUST00000183852 85 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm18665-201ENSMUST00000189783 270 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm28169-201ENSMUST00000190342 345 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm42719-201ENSMUST00000197393 355 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm43264-201ENSMUST00000202284 325 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm8219-201ENSMUST00000218309 242 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm25006-201ENSMUST00000083813 107 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Gm24698-201ENSMUST00000083883 130 ntBASIC2.39□□□□□ -2.03
Usp39Q3TIX9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Mir466k-201ENSMUST00000116774 122 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm25623-201ENSMUST00000157216 108 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm26084-201ENSMUST00000157903 104 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm24813-201ENSMUST00000175310 84 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm24573-201ENSMUST00000175499 112 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm25646-201ENSMUST00000178527 79 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm25933-201ENSMUST00000178943 108 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm26435-201ENSMUST00000179026 107 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm43626-201ENSMUST00000198575 162 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm26126-201ENSMUST00000083188 164 ntBASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Usp39Q3TIX9 Gm22935-201ENSMUST00000103960 104 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm22270-201ENSMUST00000104034 132 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm24894-201ENSMUST00000122744 118 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Mir378a-201ENSMUST00000198300 66 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm44024-201ENSMUST00000203008 476 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm8031-201ENSMUST00000213430 626 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm22738-201ENSMUST00000083440 147 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp39Q3TIX9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22790-201ENSMUST00000157229 129 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25098-201ENSMUST00000177580 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm23356-201ENSMUST00000177610 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24027-201ENSMUST00000177611 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22511-201ENSMUST00000177628 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22630-201ENSMUST00000177781 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm23560-201ENSMUST00000177782 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25462-201ENSMUST00000177833 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm26059-201ENSMUST00000177865 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22255-201ENSMUST00000177933 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25146-201ENSMUST00000177976 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25523-201ENSMUST00000178044 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24585-201ENSMUST00000178104 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22627-201ENSMUST00000178127 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22912-201ENSMUST00000178242 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24866-201ENSMUST00000178338 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22524-201ENSMUST00000178357 79 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms