Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm25131-201ENSMUST00000082653 151 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm16358-201ENSMUST00000146046 210 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm26271-201ENSMUST00000158349 104 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm23731-201ENSMUST00000083749 107 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Mir670-201ENSMUST00000102380 100 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm24340-201ENSMUST00000104208 97 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm26173-201ENSMUST00000158416 136 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm22851-201ENSMUST00000178741 94 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm25074-201ENSMUST00000178782 94 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-0.28□□□□□ -2.45
Cux1P53564 AC164297.3-201ENSMUST00000224238 94 ntBASIC-0.28□□□□□ -2.45
Cux1P53564 Mir880-201ENSMUST00000104809 78 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm22885-201ENSMUST00000157410 107 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
Cux1P53564 Gm25121-201ENSMUST00000179846 79 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm28196-201ENSMUST00000187719 640 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm26314-201ENSMUST00000083891 107 ntBASIC-0.29□□□□□ -2.46
Cux1P53564 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 AC156790.3-201ENSMUST00000226200 254 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.3□□□□□ -2.46
Cux1P53564 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.31□□□□□ -2.46
Cux1P53564 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.31□□□□□ -2.46
Cux1P53564 Mir743b-201ENSMUST00000104751 77 ntBASIC-0.32□□□□□ -2.46
Cux1P53564 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.32□□□□□ -2.46
Cux1P53564 Gm23557-201ENSMUST00000157820 138 ntBASIC-0.32□□□□□ -2.46
Cux1P53564 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.32□□□□□ -2.46
Cux1P53564 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Cux1P53564 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.32□□□□□ -2.46
Cux1P53564 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm26200-201ENSMUST00000180273 79 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm17906-201ENSMUST00000202480 901 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Cux1P53564 Gm22572-201ENSMUST00000082985 105 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm23093-201ENSMUST00000083450 102 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Cux1P53564 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm25825-201ENSMUST00000157091 124 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
Cux1P53564 Snord85-201ENSMUST00000083262 73 ntBASIC-0.33□□□□□ -2.46
Cux1P53564 Snord69-201ENSMUST00000104024 80 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm24921-201ENSMUST00000083024 107 ntBASIC-0.34□□□□□ -2.46
Cux1P53564 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Mir1b-201ENSMUST00000117012 122 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Snord116l12-201ENSMUST00000179816 94 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.35□□□□□ -2.47
Cux1P53564 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Cux1P53564 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.36□□□□□ -2.47
Cux1P53564 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.36□□□□□ -2.47
Cux1P53564 Gm24355-201ENSMUST00000082858 122 ntBASIC-0.36□□□□□ -2.47
Cux1P53564 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-0.36□□□□□ -2.47
Cux1P53564 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.37□□□□□ -2.47
Cux1P53564 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.37□□□□□ -2.47
Cux1P53564 Gm38213-201ENSMUST00000193203 173 ntBASIC-0.37□□□□□ -2.47
Cux1P53564 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-0.37□□□□□ -2.47
Cux1P53564 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.37□□□□□ -2.47
Cux1P53564 Mir701-201ENSMUST00000102208 109 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm9973-202ENSMUST00000220926 166 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm24356-201ENSMUST00000082859 106 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm23819-201ENSMUST00000158744 109 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm38333-201ENSMUST00000193608 604 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-0.38□□□□□ -2.47
Cux1P53564 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.38□□□□□ -2.47
Cux1P53564 Mir706-201ENSMUST00000102262 84 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms