Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.45□□□□□ -2.02
Shmt1P50431 Gm25130-201ENSMUST00000082650 156 ntBASIC2.45□□□□□ -2.02
Shmt1P50431 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
Shmt1P50431 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Shmt1P50431 Gm22105-201ENSMUST00000116734 116 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Gm24010-201ENSMUST00000157731 282 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Gm22517-201ENSMUST00000158265 136 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Gm23005-201ENSMUST00000158950 136 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Gm24813-201ENSMUST00000175310 84 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.44□□□□□ -2.02
Shmt1P50431 Gm25513-201ENSMUST00000083861 162 ntBASIC2.44□□□□□ -2.02
Shmt1P50431 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.44□□□□□ -2.02
Shmt1P50431 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Mir344e-201ENSMUST00000104677 66 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Gm14626-201ENSMUST00000117619 216 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Gm42855-201ENSMUST00000197388 253 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Gm44555-201ENSMUST00000209008 148 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.43□□□□□ -2.02
Shmt1P50431 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Shmt1P50431 Gm25825-201ENSMUST00000157091 124 ntBASIC2.42□□□□□ -2.02
Shmt1P50431 Gm25491-201ENSMUST00000158733 308 ntBASIC2.42□□□□□ -2.02
Shmt1P50431 Gm23190-201ENSMUST00000180307 64 ntBASIC2.42□□□□□ -2.02
Shmt1P50431 Snord61-201ENSMUST00000083176 71 ntBASIC2.42□□□□□ -2.02
Shmt1P50431 Gm25987-201ENSMUST00000083234 107 ntBASIC2.42□□□□□ -2.02
Shmt1P50431 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Shmt1P50431 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.41□□□□□ -2.02
Shmt1P50431 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Shmt1P50431 Mir669d-201ENSMUST00000104644 121 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm13433-201ENSMUST00000121701 240 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm16355-201ENSMUST00000128606 231 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm24475-201ENSMUST00000157435 143 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm25910-201ENSMUST00000157620 140 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm25882-201ENSMUST00000157784 85 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm23043-201ENSMUST00000157890 109 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm26157-201ENSMUST00000158974 126 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Mir6353-201ENSMUST00000183596 113 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm27959-201ENSMUST00000185172 111 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm8508-201ENSMUST00000061226 363 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm23095-201ENSMUST00000083446 107 ntBASIC2.41□□□□□ -2.02
Shmt1P50431 Gm25323-201ENSMUST00000122555 103 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Gm24634-201ENSMUST00000158672 107 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Gm27934-201ENSMUST00000158795 63 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Gm25820-202ENSMUST00000197479 128 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Gm45522-201ENSMUST00000210784 166 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Gm25797-201ENSMUST00000082640 107 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Mir155-201ENSMUST00000083463 65 ntBASIC2.4□□□□□ -2.03
Shmt1P50431 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Shmt1P50431 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Shmt1P50431 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Shmt1P50431 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Shmt1P50431 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Shmt1P50431 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Shmt1P50431 Gm22003-201ENSMUST00000101885 107 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm25828-201ENSMUST00000157087 95 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm26105-201ENSMUST00000157253 190 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm23033-201ENSMUST00000157996 134 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm22946-201ENSMUST00000158558 82 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm22264-201ENSMUST00000178200 107 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm22756-201ENSMUST00000180118 107 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm38298-201ENSMUST00000193578 118 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm44320-201ENSMUST00000199276 86 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm26054-201ENSMUST00000083037 107 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm22738-201ENSMUST00000083440 147 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Gm24492-201ENSMUST00000083798 107 ntBASIC2.39□□□□□ -2.03
Shmt1P50431 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Shmt1P50431 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 Snord100-201ENSMUST00000116836 74 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 Gm25060-201ENSMUST00000157374 130 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Shmt1P50431 Gm35736-201ENSMUST00000203681 313 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 Snord104-201ENSMUST00000083192 70 ntBASIC2.38□□□□□ -2.03
Shmt1P50431 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Shmt1P50431 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Shmt1P50431 Gm16186-201ENSMUST00000120132 216 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm24916-201ENSMUST00000157287 79 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Mir1927-201ENSMUST00000158579 109 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Mir6350-201ENSMUST00000183639 105 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm37377-201ENSMUST00000191733 304 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm43722-201ENSMUST00000196054 124 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm44921-201ENSMUST00000205290 301 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm44976-201ENSMUST00000205543 261 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.37□□□□□ -2.03
Shmt1P50431 Gm23303-201ENSMUST00000082714 152 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm23445-201ENSMUST00000082800 107 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Mir201-201ENSMUST00000083470 66 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Gm26175-201ENSMUST00000083794 131 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Shmt1P50431 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.37□□□□□ -2.03
Shmt1P50431 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Shmt1P50431 Gm26280-201ENSMUST00000157096 101 ntBASIC2.36□□□□□ -2.03
Shmt1P50431 Gm24926-201ENSMUST00000178053 79 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms