Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm14491-201ENSMUST00000121919 199 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Gm23892-201ENSMUST00000158105 130 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Gm22433-201ENSMUST00000158550 142 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Gm26022-201ENSMUST00000158663 108 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Gm17113-201ENSMUST00000170118 171 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.05□□□□□ -2.08
Ercc3P49135 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Ercc3P49135 Mir541-201ENSMUST00000102097 90 ntBASIC2.04□□□□□ -2.08
Ercc3P49135 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.04□□□□□ -2.08
Ercc3P49135 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.04□□□□□ -2.08
Ercc3P49135 Gm44563-201ENSMUST00000207958 178 ntBASIC2.04□□□□□ -2.08
Ercc3P49135 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.04□□□□□ -2.08
Ercc3P49135 Gm22248-201ENSMUST00000082482 150 ntBASIC2.04□□□□□ -2.08
Ercc3P49135 Gm23100-201ENSMUST00000083455 141 ntBASIC2.04□□□□□ -2.08
Ercc3P49135 Mir301b-201ENSMUST00000102333 97 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm22145-201ENSMUST00000157396 148 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm25720-201ENSMUST00000157503 105 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm24076-201ENSMUST00000158179 94 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm23258-201ENSMUST00000158319 106 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm23182-201ENSMUST00000158688 135 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm24229-201ENSMUST00000158830 118 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.03□□□□□ -2.08
Ercc3P49135 Snora19-201ENSMUST00000082962 132 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm23658-201ENSMUST00000083233 132 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Mir155-201ENSMUST00000083463 65 ntBASIC2.03□□□□□ -2.08
Ercc3P49135 Gm22761-201ENSMUST00000102278 96 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm23836-201ENSMUST00000104434 129 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm25884-201ENSMUST00000157782 62 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Mir1951-201ENSMUST00000157981 89 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm22386-201ENSMUST00000158192 129 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm24222-201ENSMUST00000158834 93 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm29308-201ENSMUST00000188863 315 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm28537-201ENSMUST00000189026 315 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm29631-201ENSMUST00000191065 315 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm29014-201ENSMUST00000191422 326 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Gm19855-201ENSMUST00000210145 249 ntBASIC2.02□□□□□ -2.09
Ercc3P49135 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Ercc3P49135 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ercc3P49135 Gm23170-201ENSMUST00000157158 106 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ercc3P49135 Gm37715-201ENSMUST00000193206 235 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Gm44308-201ENSMUST00000197080 99 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Gm24038-201ENSMUST00000082872 159 ntBASIC2.01□□□□□ -2.09
Ercc3P49135 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ercc3P49135 Gm24594-201ENSMUST00000122502 99 ntBASIC2□□□□□ -2.09
Ercc3P49135 Gm23466-201ENSMUST00000157133 106 ntBASIC2□□□□□ -2.09
Ercc3P49135 Gm28020-201ENSMUST00000157739 67 ntBASIC2□□□□□ -2.09
Ercc3P49135 AL772271.1-201ENSMUST00000196848 65 ntBASIC2□□□□□ -2.09
Ercc3P49135 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2□□□□□ -2.09
Ercc3P49135 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2□□□□□ -2.09
Ercc3P49135 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ercc3P49135 Gm24121-201ENSMUST00000102029 106 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Mir223-201ENSMUST00000102112 110 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm24729-201ENSMUST00000158225 137 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm24677-201ENSMUST00000158755 150 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ercc3P49135 Mir7241-201ENSMUST00000184532 64 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm18433-201ENSMUST00000192747 197 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm22421-201ENSMUST00000083058 107 ntBASIC1.99□□□□□ -2.09
Ercc3P49135 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Ercc3P49135 Gm6897-201ENSMUST00000117714 138 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm14758-201ENSMUST00000119104 138 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm11204-201ENSMUST00000122438 147 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm22082-201ENSMUST00000157587 161 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm23208-201ENSMUST00000158666 127 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm24366-201ENSMUST00000175383 86 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm27694-201ENSMUST00000184740 86 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm6105-201ENSMUST00000200580 624 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.98□□□□□ -2.09
Ercc3P49135 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Gm25943-201ENSMUST00000103791 90 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Gm23101-201ENSMUST00000157550 137 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Gm25424-201ENSMUST00000157612 58 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Gm25285-201ENSMUST00000178951 90 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Gm25936-201ENSMUST00000179952 114 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Snord14a-201ENSMUST00000082807 87 ntBASIC1.97□□□□□ -2.09
Ercc3P49135 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ercc3P49135 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ercc3P49135 Gm25832-201ENSMUST00000104140 130 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Gm26181-201ENSMUST00000157687 106 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Gm24572-201ENSMUST00000175505 88 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.96□□□□□ -2.1
Ercc3P49135 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.96□□□□□ -2.1
Ercc3P49135 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms