Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm42719-201ENSMUST00000197393 355 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm19855-201ENSMUST00000210145 249 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm24461-201ENSMUST00000082735 103 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm23138-201ENSMUST00000083365 103 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Rfx1P48377 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm24586-201ENSMUST00000116695 89 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm13756-201ENSMUST00000117618 222 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3□□□□□ -1.93
Rfx1P48377 Gm24851-201ENSMUST00000158028 103 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm20718-201ENSMUST00000176058 259 ntBASIC3□□□□□ -1.93
Rfx1P48377 Mir7050-201ENSMUST00000184636 60 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3□□□□□ -1.93
Rfx1P48377 Gm3724-201ENSMUST00000197957 349 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm44464-201ENSMUST00000198010 138 ntBASIC3□□□□□ -1.93
Rfx1P48377 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3□□□□□ -1.93
Rfx1P48377 Gm44555-201ENSMUST00000209008 148 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm45492-201ENSMUST00000211611 288 ntBASIC3□□□□□ -1.93
Rfx1P48377 mt-Ta-201ENSMUST00000082398 69 ntBASIC3□□□□□ -1.93
Rfx1P48377 Gm22249-201ENSMUST00000082485 136 ntBASIC3□□□□□ -1.93
Rfx1P48377 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Rfx1P48377 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Rfx1P48377 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Rfx1P48377 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Rfx1P48377 Gm24280-201ENSMUST00000104237 134 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Gm23898-201ENSMUST00000158111 103 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Gm22011-201ENSMUST00000158790 123 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Gm25528-201ENSMUST00000180264 132 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Gm25788-201ENSMUST00000082721 131 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Rfx1P48377 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.99□□□□□ -1.93
Rfx1P48377 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Rfx1P48377 Gm37807-201ENSMUST00000194310 190 ntBASIC2.98□□□□□ -1.93
Rfx1P48377 Gm43722-201ENSMUST00000196054 124 ntBASIC2.98□□□□□ -1.93
Rfx1P48377 Gm44325-201ENSMUST00000196757 77 ntBASIC2.98□□□□□ -1.93
Rfx1P48377 Gm45791-201ENSMUST00000212908 352 ntBASIC2.98□□□□□ -1.93
Rfx1P48377 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Rfx1P48377 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rfx1P48377 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Rfx1P48377 Gm22782-201ENSMUST00000104082 132 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm26473-201ENSMUST00000116763 127 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm24291-201ENSMUST00000157633 162 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm25884-201ENSMUST00000157782 62 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm23277-201ENSMUST00000157914 136 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm22946-201ENSMUST00000158558 82 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm22775-201ENSMUST00000177630 120 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm23569-201ENSMUST00000180120 120 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Mir7118-201ENSMUST00000197760 61 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm30534-201ENSMUST00000217928 207 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.97□□□□□ -1.93
Rfx1P48377 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Mir300-201ENSMUST00000083485 79 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Mir34a-201ENSMUST00000083559 102 ntBASIC2.97□□□□□ -1.93
Rfx1P48377 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rfx1P48377 Gm22105-201ENSMUST00000116734 116 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Gm25373-201ENSMUST00000158156 115 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Gm23260-201ENSMUST00000158317 172 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Gm23370-201ENSMUST00000199545 130 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Gm44966-201ENSMUST00000208096 157 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Mir489-201ENSMUST00000093599 107 ntBASIC2.96□□□□□ -1.94
Rfx1P48377 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Rfx1P48377 Gm23128-201ENSMUST00000104257 132 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Mir1195-201ENSMUST00000116818 98 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm24475-201ENSMUST00000157435 143 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm24559-201ENSMUST00000157519 121 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm24717-201ENSMUST00000157522 124 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm22966-201ENSMUST00000157957 129 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm23128-202ENSMUST00000196578 133 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Gm8031-201ENSMUST00000213430 626 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Snord7-201ENSMUST00000083781 97 ntBASIC2.95□□□□□ -1.94
Rfx1P48377 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rfx1P48377 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Rfx1P48377 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rfx1P48377 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Rfx1P48377 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.94□□□□□ -1.94
Rfx1P48377 Mir3103-201ENSMUST00000175474 67 ntBASIC2.94□□□□□ -1.94
Rfx1P48377 Gm25797-201ENSMUST00000082640 107 ntBASIC2.94□□□□□ -1.94
Rfx1P48377 Gm24261-201ENSMUST00000083744 104 ntBASIC2.94□□□□□ -1.94
Rfx1P48377 Snora33-201ENSMUST00000093556 129 ntBASIC2.94□□□□□ -1.94
Rfx1P48377 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Rfx1P48377 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Rfx1P48377 Gm24670-201ENSMUST00000104154 132 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Gm23470-201ENSMUST00000157129 120 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Gm23567-201ENSMUST00000178005 107 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Gm3852-201ENSMUST00000182781 264 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Mir93-201ENSMUST00000083593 88 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Gm22681-201ENSMUST00000083853 106 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Rfx1P48377 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.93□□□□□ -1.94
Rfx1P48377 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Rfx1P48377 Gm27532-201ENSMUST00000183726 113 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms