Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm11798-201ENSMUST00000119150 421 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm12837-201ENSMUST00000120131 373 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm25825-201ENSMUST00000157091 124 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm22818-201ENSMUST00000157446 104 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm23020-201ENSMUST00000158766 253 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm28256-201ENSMUST00000188953 139 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm28559-201ENSMUST00000190532 139 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm42988-201ENSMUST00000198116 225 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.13□□□□□ -2.39
Cdx2P43241 Gm24793-201ENSMUST00000104289 132 ntBASIC0.12□□□□□ -2.39
Cdx2P43241 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Cdx2P43241 Gm25838-201ENSMUST00000158920 120 ntBASIC0.12□□□□□ -2.39
Cdx2P43241 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.12□□□□□ -2.39
Cdx2P43241 Mir6346-201ENSMUST00000183982 81 ntBASIC0.12□□□□□ -2.39
Cdx2P43241 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.12□□□□□ -2.39
Cdx2P43241 Gm44211-201ENSMUST00000204867 145 ntBASIC0.12□□□□□ -2.39
Cdx2P43241 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.12□□□□□ -2.39
Cdx2P43241 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.12□□□□□ -2.39
Cdx2P43241 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Cdx2P43241 Gm26135-201ENSMUST00000101993 72 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm25318-201ENSMUST00000122554 314 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm26274-201ENSMUST00000157103 321 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Mir1931-201ENSMUST00000158589 119 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Mir3089-201ENSMUST00000175350 84 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Snord50b-201ENSMUST00000178497 72 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm28288-201ENSMUST00000191019 214 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm45541-201ENSMUST00000210443 54 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm22685-201ENSMUST00000082848 106 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm23448-201ENSMUST00000083151 104 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Gm24616-201ENSMUST00000083274 139 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Mir34a-201ENSMUST00000083559 102 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 Mir32-201ENSMUST00000083610 70 ntBASIC0.11□□□□□ -2.39
Cdx2P43241 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm14766-201ENSMUST00000121689 367 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm23466-201ENSMUST00000157133 106 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm22447-201ENSMUST00000158155 92 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm23024-201ENSMUST00000158770 292 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm16539-201ENSMUST00000160086 327 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm17148-201ENSMUST00000164702 249 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Cdx2P43241 Gm25855-201ENSMUST00000082787 72 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Mir141-201ENSMUST00000083540 72 ntBASIC0.1□□□□□ -2.39
Cdx2P43241 Gm12584-201ENSMUST00000117109 1105 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Gm14491-201ENSMUST00000121919 199 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Gm24903-201ENSMUST00000158131 126 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Gm22113-201ENSMUST00000158343 104 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Gm24487-201ENSMUST00000178017 63 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.09□□□□□ -2.4
Cdx2P43241 Gm15719-201ENSMUST00000120619 635 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 Gm23853-201ENSMUST00000158375 104 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 Gm27957-201ENSMUST00000184054 127 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 Gm29014-201ENSMUST00000191422 326 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.08□□□□□ -2.4
Cdx2P43241 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Cdx2P43241 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Cdx2P43241 Gm23749-201ENSMUST00000104223 131 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm24283-201ENSMUST00000104233 107 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Snord89-201ENSMUST00000104516 110 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm25110-201ENSMUST00000116684 121 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm25775-201ENSMUST00000116716 121 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm24795-201ENSMUST00000116737 121 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm25171-201ENSMUST00000116926 121 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm14536-201ENSMUST00000118324 138 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm15027-201ENSMUST00000120922 138 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm14287-201ENSMUST00000121060 117 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm23212-201ENSMUST00000122718 60 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm24241-201ENSMUST00000157787 145 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm23838-201ENSMUST00000158067 162 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Gm26430-201ENSMUST00000178054 107 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
Cdx2P43241 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Cdx2P43241 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
Cdx2P43241 Gm3867-201ENSMUST00000086108 279 ntBASIC0.07□□□□□ -2.4
Cdx2P43241 Mir709-201ENSMUST00000102190 88 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Gm24833-201ENSMUST00000116775 120 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Gm25507-201ENSMUST00000116981 144 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
Cdx2P43241 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Gm25007-201ENSMUST00000083808 133 ntBASIC0.06□□□□□ -2.4
Cdx2P43241 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Cdx2P43241 Gm12225-201ENSMUST00000117995 298 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm14413-201ENSMUST00000122158 408 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm23036-201ENSMUST00000157885 99 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm25434-201ENSMUST00000158278 167 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm25952-201ENSMUST00000175329 74 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Mir3108-201ENSMUST00000175500 79 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm26335-201ENSMUST00000178449 107 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm44726-201ENSMUST00000203427 217 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.05□□□□□ -2.4
Cdx2P43241 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Cdx2P43241 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Cdx2P43241 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms