Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.98□□□□□ -2.57
HttP42859 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
HttP42859 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-0.98□□□□□ -2.57
HttP42859 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.98□□□□□ -2.57
HttP42859 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC-0.98□□□□□ -2.57
HttP42859 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.98□□□□□ -2.57
HttP42859 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm22193-201ENSMUST00000116868 76 ntBASIC-0.98□□□□□ -2.57
HttP42859 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC-0.98□□□□□ -2.57
HttP42859 Gm23589-201ENSMUST00000157660 105 ntBASIC-0.98□□□□□ -2.57
HttP42859 Mir880-201ENSMUST00000104809 78 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
HttP42859 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
HttP42859 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.99□□□□□ -2.57
HttP42859 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm23650-201ENSMUST00000083355 70 ntBASIC-0.99□□□□□ -2.57
HttP42859 Gm24233-201ENSMUST00000104317 122 ntBASIC-1□□□□□ -2.57
HttP42859 Mir208b-201ENSMUST00000104735 77 ntBASIC-1□□□□□ -2.57
HttP42859 Gm23316-201ENSMUST00000157997 114 ntBASIC-1□□□□□ -2.57
HttP42859 AC157476.1-201ENSMUST00000215555 169 ntBASIC-1□□□□□ -2.57
HttP42859 AC166358.10-201ENSMUST00000220556 144 ntBASIC-1□□□□□ -2.57
HttP42859 Gm22509-201ENSMUST00000082775 107 ntBASIC-1□□□□□ -2.57
HttP42859 Gm22452-201ENSMUST00000122804 104 ntBASIC-1□□□□□ -2.57
HttP42859 Gm28016-201ENSMUST00000184594 196 ntBASIC-1□□□□□ -2.57
HttP42859 Gm37193-201ENSMUST00000193087 513 ntBASIC-1□□□□□ -2.57
HttP42859 Gm44125-201ENSMUST00000203068 448 ntBASIC-1□□□□□ -2.57
HttP42859 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1□□□□□ -2.57
HttP42859 Gm24164-201ENSMUST00000093663 104 ntBASIC-1□□□□□ -2.57
HttP42859 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-1□□□□□ -2.57
HttP42859 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-1□□□□□ -2.57
HttP42859 Gm13729-201ENSMUST00000120328 406 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm23586-201ENSMUST00000157657 123 ntBASIC-1.01□□□□□ -2.57
HttP42859 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
HttP42859 Gm14298-201ENSMUST00000139032 237 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm24649-201ENSMUST00000157106 134 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm24264-201ENSMUST00000179835 94 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
HttP42859 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm10297-201ENSMUST00000207136 651 ntBASIC-1.01□□□□□ -2.57
HttP42859 Gm13131-201ENSMUST00000122228 321 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm16359-201ENSMUST00000124511 289 ntBASIC-1.02□□□□□ -2.57
HttP42859 Mir1942-201ENSMUST00000157274 63 ntBASIC-1.02□□□□□ -2.57
HttP42859 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm22576-201ENSMUST00000083733 104 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm11798-201ENSMUST00000119150 421 ntBASIC-1.02□□□□□ -2.57
HttP42859 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC-1.02□□□□□ -2.57
HttP42859 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm23055-201ENSMUST00000082805 94 ntBASIC-1.02□□□□□ -2.57
HttP42859 Mir767-201ENSMUST00000103256 107 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm16307-201ENSMUST00000161269 210 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm17906-201ENSMUST00000202480 901 ntBASIC-1.02□□□□□ -2.57
HttP42859 Mir340-201ENSMUST00000083483 98 ntBASIC-1.02□□□□□ -2.57
HttP42859 Gm25884-201ENSMUST00000157782 62 ntBASIC-1.03□□□□□ -2.57
HttP42859 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.03□□□□□ -2.57
HttP42859 Gm10172-201ENSMUST00000085929 558 ntBASIC-1.03□□□□□ -2.57
HttP42859 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.03□□□□□ -2.57
HttP42859 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC-1.03□□□□□ -2.57
HttP42859 Gm37923-201ENSMUST00000191624 161 ntBASIC-1.03□□□□□ -2.57
HttP42859 Gm38364-201ENSMUST00000191814 179 ntBASIC-1.03□□□□□ -2.57
HttP42859 Mir376b-201ENSMUST00000195930 82 ntBASIC-1.03□□□□□ -2.57
HttP42859 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC-1.03□□□□□ -2.57
HttP42859 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-1.03□□□□□ -2.57
HttP42859 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
HttP42859 Gm23846-201ENSMUST00000083835 107 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm25944-201ENSMUST00000178758 94 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm44404-201ENSMUST00000203979 636 ntBASIC-1.04□□□□□ -2.58
HttP42859 AL645546.2-201ENSMUST00000224526 265 ntBASIC-1.04□□□□□ -2.58
HttP42859 AC159093.2-201ENSMUST00000227881 297 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm22545-201ENSMUST00000104350 132 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm22392-201ENSMUST00000177971 107 ntBASIC-1.04□□□□□ -2.58
HttP42859 Mir6355-201ENSMUST00000183687 106 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm27428-201ENSMUST00000184289 110 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.04□□□□□ -2.58
HttP42859 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.04□□□□□ -2.58
HttP42859 AC140477.1-201ENSMUST00000222354 246 ntBASIC-1.04□□□□□ -2.58
HttP42859 Gm24909-201ENSMUST00000157290 280 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm26245-201ENSMUST00000178491 107 ntBASIC-1.05□□□□□ -2.58
HttP42859 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
HttP42859 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC-1.05□□□□□ -2.58
HttP42859 Mir335-201ENSMUST00000083567 98 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm22753-201ENSMUST00000083657 107 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.05□□□□□ -2.58
HttP42859 Mir687-201ENSMUST00000102166 89 ntBASIC-1.05□□□□□ -2.58
HttP42859 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.05□□□□□ -2.58
HttP42859 Gm23184-201ENSMUST00000122594 131 ntBASIC-1.05□□□□□ -2.58
HttP42859 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-1.05□□□□□ -2.58
HttP42859 Gm28740-201ENSMUST00000186142 215 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm23939-201ENSMUST00000082880 133 ntBASIC-1.05□□□□□ -2.58
HttP42859 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC-1.06□□□□□ -2.58
HttP42859 Gm23763-201ENSMUST00000158345 60 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 174.1 ms