Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm23658-201ENSMUST00000083233 132 ntBASIC1.52□□□□□ -2.17
VtnP29788 Gm11204-201ENSMUST00000122438 147 ntBASIC1.51□□□□□ -2.17
VtnP29788 Gm23892-201ENSMUST00000158105 130 ntBASIC1.51□□□□□ -2.17
VtnP29788 Gm23542-201ENSMUST00000158208 96 ntBASIC1.51□□□□□ -2.17
VtnP29788 Gm24729-201ENSMUST00000158225 137 ntBASIC1.51□□□□□ -2.17
VtnP29788 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.51□□□□□ -2.17
VtnP29788 Gm10360-201ENSMUST00000097219 272 ntBASIC1.51□□□□□ -2.17
VtnP29788 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
VtnP29788 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VtnP29788 Mir873a-201ENSMUST00000104863 77 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm15214-201ENSMUST00000122155 470 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm22145-201ENSMUST00000157396 148 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm22217-201ENSMUST00000157556 313 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm23194-201ENSMUST00000158813 105 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm23714-201ENSMUST00000179259 105 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm37693-201ENSMUST00000194562 234 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm44308-201ENSMUST00000197080 99 ntBASIC1.5□□□□□ -2.17
VtnP29788 Gm6105-201ENSMUST00000200580 624 ntBASIC1.5□□□□□ -2.17
VtnP29788 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.5□□□□□ -2.17
VtnP29788 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.5□□□□□ -2.17
VtnP29788 Mir148b-201ENSMUST00000083626 97 ntBASIC1.5□□□□□ -2.17
VtnP29788 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
VtnP29788 Gm24595-201ENSMUST00000122501 110 ntBASIC1.49□□□□□ -2.17
VtnP29788 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm25914-201ENSMUST00000157618 153 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
VtnP29788 Snord87-201ENSMUST00000175437 87 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm23370-201ENSMUST00000199545 130 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm5010-201ENSMUST00000213131 260 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
VtnP29788 Mir155-201ENSMUST00000083463 65 ntBASIC1.49□□□□□ -2.17
VtnP29788 Mir107-201ENSMUST00000083660 87 ntBASIC1.49□□□□□ -2.17
VtnP29788 Snora33-201ENSMUST00000093556 129 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
VtnP29788 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VtnP29788 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.49□□□□□ -2.17
VtnP29788 Gm23836-201ENSMUST00000104434 129 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm6897-201ENSMUST00000117714 138 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm14758-201ENSMUST00000119104 138 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm15861-201ENSMUST00000120979 339 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm25654-201ENSMUST00000158467 88 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm2962-201ENSMUST00000159266 336 ntBASIC1.48□□□□□ -2.17
VtnP29788 Mir6388-201ENSMUST00000184417 75 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.48□□□□□ -2.17
VtnP29788 Gm28383-201ENSMUST00000187563 139 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm29262-201ENSMUST00000190084 196 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm45508-201ENSMUST00000209298 299 ntBASIC1.48□□□□□ -2.17
VtnP29788 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.48□□□□□ -2.17
VtnP29788 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm24406-201ENSMUST00000083026 128 ntBASIC1.48□□□□□ -2.17
VtnP29788 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.48□□□□□ -2.17
VtnP29788 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
VtnP29788 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
VtnP29788 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VtnP29788 Gm23718-201ENSMUST00000157350 307 ntBASIC1.47□□□□□ -2.17
VtnP29788 Mir1967-201ENSMUST00000157789 82 ntBASIC1.47□□□□□ -2.17
VtnP29788 Mir669k-201ENSMUST00000177742 127 ntBASIC1.47□□□□□ -2.17
VtnP29788 Gm25673-201ENSMUST00000179957 127 ntBASIC1.47□□□□□ -2.17
VtnP29788 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.47□□□□□ -2.17
VtnP29788 Snora3-201ENSMUST00000083082 132 ntBASIC1.47□□□□□ -2.17
VtnP29788 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VtnP29788 Gm13797-201ENSMUST00000121792 120 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm23656-201ENSMUST00000122626 112 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm26181-201ENSMUST00000157687 106 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm25884-201ENSMUST00000157782 62 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm25831-201ENSMUST00000158924 163 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm33866-201ENSMUST00000196911 289 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm45116-201ENSMUST00000207392 275 ntBASIC1.46□□□□□ -2.18
VtnP29788 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.46□□□□□ -2.18
VtnP29788 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.46□□□□□ -2.18
VtnP29788 Gm24121-201ENSMUST00000102029 106 ntBASIC1.45□□□□□ -2.18
VtnP29788 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VtnP29788 Gm14937-201ENSMUST00000119709 208 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm13801-201ENSMUST00000120750 160 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm22553-201ENSMUST00000157797 295 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm24668-201ENSMUST00000158935 104 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm23967-201ENSMUST00000175062 78 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm25935-201ENSMUST00000178746 107 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm27265-201ENSMUST00000183559 77 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.45□□□□□ -2.18
VtnP29788 Mir6419-201ENSMUST00000184784 113 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.45□□□□□ -2.18
VtnP29788 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm24038-201ENSMUST00000082872 159 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm25482-201ENSMUST00000083225 107 ntBASIC1.45□□□□□ -2.18
VtnP29788 Mir320-201ENSMUST00000083594 82 ntBASIC1.45□□□□□ -2.18
VtnP29788 Gm14838-201ENSMUST00000118913 248 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm26482-201ENSMUST00000158015 62 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm24902-201ENSMUST00000158126 123 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm27694-201ENSMUST00000184740 86 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.44□□□□□ -2.18
VtnP29788 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm25357-201ENSMUST00000082745 72 ntBASIC1.44□□□□□ -2.18
VtnP29788 Mir146-201ENSMUST00000083667 65 ntBASIC1.44□□□□□ -2.18
VtnP29788 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VtnP29788 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.44□□□□□ -2.18
VtnP29788 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
VtnP29788 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VtnP29788 Snord89-201ENSMUST00000104516 110 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms