Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm24042-201ENSMUST00000083114 103 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Cd40lgP27548 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Cd40lgP27548 Mir544-201ENSMUST00000103813 78 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm14846-201ENSMUST00000121868 216 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm22479-201ENSMUST00000122566 81 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm26479-201ENSMUST00000122620 106 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm22216-201ENSMUST00000157557 114 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm23640-201ENSMUST00000157860 104 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm2962-201ENSMUST00000159266 336 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm9251-201ENSMUST00000197202 628 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.09□□□□□ -2.23
Cd40lgP27548 Gm26495-201ENSMUST00000083152 137 ntBASIC1.09□□□□□ -2.23
Cd40lgP27548 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm24379-201ENSMUST00000122695 86 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm24777-201ENSMUST00000157644 107 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm26213-201ENSMUST00000158582 110 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm26029-201ENSMUST00000158659 132 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm23182-201ENSMUST00000158688 135 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm23039-201ENSMUST00000083870 161 ntBASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Cd40lgP27548 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Mir669i-201ENSMUST00000117007 127 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm14919-201ENSMUST00000120839 390 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm23536-201ENSMUST00000157541 134 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm22164-201ENSMUST00000158413 106 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm23636-201ENSMUST00000175070 95 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm26447-201ENSMUST00000082448 129 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm22980-201ENSMUST00000082608 70 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.07□□□□□ -2.24
Cd40lgP27548 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm22984-201ENSMUST00000122751 122 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm23328-201ENSMUST00000157418 132 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm22485-201ENSMUST00000157990 109 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm26038-201ENSMUST00000158151 106 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Mir7052-201ENSMUST00000184821 65 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm38060-201ENSMUST00000194822 464 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm44325-201ENSMUST00000196757 77 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm6105-201ENSMUST00000200580 624 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.06□□□□□ -2.24
Cd40lgP27548 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm26497-201ENSMUST00000083146 107 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Snord1a-201ENSMUST00000083160 74 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Gm24764-201ENSMUST00000083686 199 ntBASIC1.06□□□□□ -2.24
Cd40lgP27548 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm25875-201ENSMUST00000104323 107 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm16032-201ENSMUST00000118534 168 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm25825-201ENSMUST00000157091 124 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm23277-201ENSMUST00000157914 136 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm23760-201ENSMUST00000158350 116 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Mir3061-201ENSMUST00000175129 91 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm25069-201ENSMUST00000175238 86 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm23419-201ENSMUST00000175523 84 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm22118-201ENSMUST00000175593 171 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm34139-201ENSMUST00000196166 294 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.05□□□□□ -2.24
Cd40lgP27548 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm22306-201ENSMUST00000082692 107 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Mir211-201ENSMUST00000083651 106 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm24252-201ENSMUST00000083700 132 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm25409-201ENSMUST00000083764 131 ntBASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Cd40lgP27548 Gm22545-201ENSMUST00000104350 132 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Gm12432-201ENSMUST00000119540 186 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Gm23194-201ENSMUST00000158813 105 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Mir5104-201ENSMUST00000175319 94 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Gm27521-201ENSMUST00000184022 64 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Gm9795-201ENSMUST00000062156 693 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Gm24624-201ENSMUST00000082617 164 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Snord96a-201ENSMUST00000082791 81 ntBASIC1.04□□□□□ -2.24
Cd40lgP27548 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Cd40lgP27548 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm23705-201ENSMUST00000104370 130 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm23987-201ENSMUST00000117039 129 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm12449-201ENSMUST00000117572 234 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 365.7 ms