Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm43238-201ENSMUST00000196463 359 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm25204-201ENSMUST00000082843 106 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm23851-201ENSMUST00000083831 103 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm25783-201ENSMUST00000122525 190 ntBASIC0.86□□□□□ -2.27
Lire1P11260 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Lire1P11260 Gm24747-201ENSMUST00000157835 87 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm23008-201ENSMUST00000158946 80 ntBASIC0.86□□□□□ -2.27
Lire1P11260 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.86□□□□□ -2.27
Lire1P11260 Gm23355-201ENSMUST00000177614 107 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm23148-201ENSMUST00000180367 107 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Mir7661-201ENSMUST00000197023 61 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm42622-201ENSMUST00000197229 355 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.86□□□□□ -2.27
Lire1P11260 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm25258-201ENSMUST00000083049 107 ntBASIC0.86□□□□□ -2.27
Lire1P11260 Gm22689-201ENSMUST00000102452 110 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm25544-201ENSMUST00000122676 120 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm24440-201ENSMUST00000157236 63 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm23996-201ENSMUST00000158062 131 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm26358-201ENSMUST00000158215 97 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm24512-201ENSMUST00000174963 65 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Mir15a-201ENSMUST00000175266 84 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm43884-201ENSMUST00000204251 559 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.85□□□□□ -2.27
Lire1P11260 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm24920-201ENSMUST00000083018 85 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm22743-201ENSMUST00000083445 133 ntBASIC0.85□□□□□ -2.27
Lire1P11260 Gm11856-201ENSMUST00000118712 276 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Gm22598-201ENSMUST00000157600 127 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Gm23898-201ENSMUST00000158111 103 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.84□□□□□ -2.27
Lire1P11260 Gm23625-201ENSMUST00000082457 100 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Gm25930-201ENSMUST00000082785 107 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Mir101a-201ENSMUST00000083517 83 ntBASIC0.84□□□□□ -2.27
Lire1P11260 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm23991-201ENSMUST00000117033 93 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm11248-201ENSMUST00000119568 201 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm24847-201ENSMUST00000158032 108 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm24499-201ENSMUST00000158446 104 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm25450-201ENSMUST00000179144 107 ntBASIC0.83□□□□□ -2.28
Lire1P11260 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.83□□□□□ -2.28
Lire1P11260 Gm14574-201ENSMUST00000120644 279 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Gm22945-201ENSMUST00000158557 157 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Mir6540-201ENSMUST00000184886 108 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.82□□□□□ -2.28
Lire1P11260 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.82□□□□□ -2.28
Lire1P11260 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Gm23140-201ENSMUST00000082487 107 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Mir216a-201ENSMUST00000083605 72 ntBASIC0.82□□□□□ -2.28
Lire1P11260 Gm25416-201ENSMUST00000104221 107 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Gm25787-201ENSMUST00000104709 92 ntBASIC0.81□□□□□ -2.28
Lire1P11260 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Gm25827-201ENSMUST00000157089 107 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Mir1951-201ENSMUST00000157981 89 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Gm23194-201ENSMUST00000158813 105 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.81□□□□□ -2.28
Lire1P11260 Gm28489-201ENSMUST00000186655 316 ntBASIC0.81□□□□□ -2.28
Lire1P11260 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.81□□□□□ -2.28
Lire1P11260 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.81□□□□□ -2.28
Lire1P11260 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Gm22248-201ENSMUST00000082482 150 ntBASIC0.81□□□□□ -2.28
Lire1P11260 Gm42606-201ENSMUST00000114209 239 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm24498-201ENSMUST00000158445 102 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm16404-201ENSMUST00000177739 468 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm14598-201ENSMUST00000180109 468 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm14625-201ENSMUST00000180231 468 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm38050-201ENSMUST00000191904 238 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.8□□□□□ -2.28
Lire1P11260 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Snord33-201ENSMUST00000083694 84 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Gm22365-201ENSMUST00000093750 117 ntBASIC0.8□□□□□ -2.28
Lire1P11260 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Lire1P11260 Gm25970-201ENSMUST00000157165 86 ntBASIC0.79□□□□□ -2.28
Lire1P11260 Gm27365-201ENSMUST00000184041 177 ntBASIC0.79□□□□□ -2.28
Lire1P11260 Gm36946-201ENSMUST00000192706 435 ntBASIC0.79□□□□□ -2.28
Lire1P11260 Gm44149-201ENSMUST00000204256 226 ntBASIC0.79□□□□□ -2.28
Lire1P11260 Gm25078-201ENSMUST00000082530 107 ntBASIC0.79□□□□□ -2.28
Lire1P11260 Mir880-201ENSMUST00000104809 78 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm25838-201ENSMUST00000158920 120 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Mir3109-201ENSMUST00000175301 88 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm27587-201ENSMUST00000185116 163 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm28927-201ENSMUST00000191528 272 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm43898-201ENSMUST00000204456 424 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm44976-201ENSMUST00000205543 261 ntBASIC0.78□□□□□ -2.28
Lire1P11260 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.78□□□□□ -2.28
Lire1P11260 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.77□□□□□ -2.29
Lire1P11260 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.77□□□□□ -2.29
Lire1P11260 Gm22883-201ENSMUST00000157376 106 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Gm24504-201ENSMUST00000157679 100 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Mir3079-201ENSMUST00000175428 90 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Gm23793-201ENSMUST00000179396 117 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.77□□□□□ -2.29
Lire1P11260 Gm24043-201ENSMUST00000083108 116 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Gm24042-201ENSMUST00000083114 103 ntBASIC0.77□□□□□ -2.29
Lire1P11260 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
Lire1P11260 Gm11572-201ENSMUST00000119164 120 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm22522-201ENSMUST00000158271 151 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms