Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm24164-201ENSMUST00000093663 104 ntBASIC0.72□□□□□ -2.29
Chmp6P0C0A3 Gm25781-201ENSMUST00000122527 84 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Mir1951-201ENSMUST00000157981 89 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Gm43624-201ENSMUST00000197368 180 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Gm42506-201ENSMUST00000202009 150 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Gm43884-201ENSMUST00000204251 559 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Gm25204-201ENSMUST00000082843 106 ntBASIC0.71□□□□□ -2.3
Chmp6P0C0A3 Gm25274-201ENSMUST00000104296 135 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm22945-201ENSMUST00000158557 157 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm25671-201ENSMUST00000178612 105 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm23307-201ENSMUST00000179167 105 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm25286-201ENSMUST00000179790 105 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm42622-201ENSMUST00000197229 355 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Chmp6P0C0A3 Gm13518-201ENSMUST00000120018 233 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm24630-201ENSMUST00000122768 106 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm22888-201ENSMUST00000158640 77 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm23182-201ENSMUST00000158688 135 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm25450-201ENSMUST00000179144 107 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Gm27365-201ENSMUST00000184041 177 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Mir376a-201ENSMUST00000197584 68 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 Mir34a-201ENSMUST00000083559 102 ntBASIC0.69□□□□□ -2.3
Chmp6P0C0A3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm26474-201ENSMUST00000116762 122 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm14761-201ENSMUST00000121363 262 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm12785-201ENSMUST00000122052 172 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm25827-201ENSMUST00000157089 107 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm22883-201ENSMUST00000157376 106 ntBASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Chmp6P0C0A3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm13560-201ENSMUST00000121865 329 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm25929-201ENSMUST00000082784 107 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Mir362-201ENSMUST00000093592 65 ntBASIC0.67□□□□□ -2.3
Chmp6P0C0A3 Gm42606-201ENSMUST00000114209 239 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm23492-201ENSMUST00000116837 115 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm25783-201ENSMUST00000122525 190 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm25970-201ENSMUST00000157165 86 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Mir6394-201ENSMUST00000184738 99 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm34015-201ENSMUST00000194908 451 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm6105-201ENSMUST00000200580 624 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm22248-201ENSMUST00000082482 150 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Gm26107-201ENSMUST00000083972 107 ntBASIC0.66□□□□□ -2.3
Chmp6P0C0A3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Gm24595-201ENSMUST00000122501 110 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Mir468-201ENSMUST00000197332 78 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Gm44149-201ENSMUST00000204256 226 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.65□□□□□ -2.31
Chmp6P0C0A3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Mir654-201ENSMUST00000104787 84 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Gm25643-201ENSMUST00000158874 103 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Gm28489-201ENSMUST00000186655 316 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Gm22365-201ENSMUST00000093750 117 ntBASIC0.64□□□□□ -2.31
Chmp6P0C0A3 Mir880-201ENSMUST00000104809 78 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm25773-201ENSMUST00000116718 127 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Mir1931-201ENSMUST00000158589 119 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm23474-201ENSMUST00000158884 75 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm23793-201ENSMUST00000179396 117 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm20923-201ENSMUST00000190009 319 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm21088-201ENSMUST00000190875 316 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Gm44352-201ENSMUST00000196358 110 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 Snord33-201ENSMUST00000083694 84 ntBASIC0.63□□□□□ -2.31
Chmp6P0C0A3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms