Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col3a1P08121 Gm22051-201ENSMUST00000117002 127 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm13801-201ENSMUST00000120750 160 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm24141-201ENSMUST00000122776 115 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.06□□□□□ -2.08
Col3a1P08121 Gm23644-201ENSMUST00000157856 77 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm23813-201ENSMUST00000175153 77 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm28825-201ENSMUST00000186233 238 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm29005-201ENSMUST00000186773 320 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.06□□□□□ -2.08
Col3a1P08121 Gm44352-201ENSMUST00000196358 110 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.06□□□□□ -2.08
Col3a1P08121 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.06□□□□□ -2.08
Col3a1P08121 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col3a1P08121 Gm26082-201ENSMUST00000104070 127 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm22494-201ENSMUST00000104495 128 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm26181-201ENSMUST00000157687 106 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm24926-201ENSMUST00000178053 79 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm22632-201ENSMUST00000178266 79 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col3a1P08121 Gm45492-201ENSMUST00000211611 288 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm22507-201ENSMUST00000082773 160 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm24355-201ENSMUST00000082858 122 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm24929-201ENSMUST00000083403 139 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Snora2b-201ENSMUST00000084005 137 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm10172-201ENSMUST00000085929 558 ntBASIC2.05□□□□□ -2.08
Col3a1P08121 Gm26482-201ENSMUST00000158015 62 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Gm43911-201ENSMUST00000203097 76 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Gm44052-201ENSMUST00000203382 396 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Gm5010-201ENSMUST00000213131 260 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Col3a1P08121 Gm25136-201ENSMUST00000083253 115 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Mir488-201ENSMUST00000093595 109 ntBASIC2.04□□□□□ -2.08
Col3a1P08121 Gm25107-201ENSMUST00000122472 129 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm25980-201ENSMUST00000157176 218 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm22075-201ENSMUST00000158599 192 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm24572-201ENSMUST00000175505 88 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Mir8119-201ENSMUST00000183371 129 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm29553-201ENSMUST00000189692 279 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm25142-201ENSMUST00000082698 107 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Snord104-201ENSMUST00000083192 70 ntBASIC2.03□□□□□ -2.08
Col3a1P08121 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col3a1P08121 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col3a1P08121 Gm26081-201ENSMUST00000104068 132 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm22673-201ENSMUST00000104415 131 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm12143-201ENSMUST00000119666 332 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm22477-201ENSMUST00000122569 316 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm23589-201ENSMUST00000157660 105 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm22212-201ENSMUST00000158096 106 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm24174-201ENSMUST00000158933 111 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm27698-201ENSMUST00000184060 249 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm28383-201ENSMUST00000187563 139 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm43602-201ENSMUST00000196772 300 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm22248-201ENSMUST00000082482 150 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm22299-201ENSMUST00000082663 136 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm25789-201ENSMUST00000083294 76 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Gm24449-201ENSMUST00000083985 106 ntBASIC2.02□□□□□ -2.09
Col3a1P08121 Mir878-201ENSMUST00000104680 78 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm14626-201ENSMUST00000117619 216 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm22957-201ENSMUST00000122511 123 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col3a1P08121 Gm24440-201ENSMUST00000157236 63 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm22553-201ENSMUST00000157797 295 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm24512-201ENSMUST00000174963 65 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir6379-201ENSMUST00000183392 115 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.01□□□□□ -2.09
Col3a1P08121 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir208a-201ENSMUST00000083498 83 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm23947-201ENSMUST00000093636 107 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm6952-201ENSMUST00000118629 159 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm11356-201ENSMUST00000118974 192 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.01□□□□□ -2.09
Col3a1P08121 Gm27921-201ENSMUST00000183968 108 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir6950-201ENSMUST00000184438 73 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir6371-201ENSMUST00000184470 111 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm37545-201ENSMUST00000186512 148 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.01□□□□□ -2.09
Col3a1P08121 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm10298-201ENSMUST00000074801 265 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm22421-201ENSMUST00000083058 107 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir30d-201ENSMUST00000083503 82 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Mir320-201ENSMUST00000083594 82 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 Gm22681-201ENSMUST00000083853 106 ntBASIC2.01□□□□□ -2.09
Col3a1P08121 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2□□□□□ -2.09
Col3a1P08121 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col3a1P08121 Gm24984-201ENSMUST00000104454 133 ntBASIC2□□□□□ -2.09
Col3a1P08121 Snord90-201ENSMUST00000104568 111 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm24916-201ENSMUST00000157287 79 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm26049-201ENSMUST00000157313 108 ntBASIC2□□□□□ -2.09
Col3a1P08121 Scarna3b-201ENSMUST00000157533 139 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm22213-201ENSMUST00000157564 119 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm23033-201ENSMUST00000157996 134 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col3a1P08121 Gm38298-201ENSMUST00000193578 118 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 189.4 ms