Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm25783-201ENSMUST00000122525 190 ntBASIC2.03□□□□□ -2.08
Best1O88870 Gm23170-201ENSMUST00000157158 106 ntBASIC2.03□□□□□ -2.08
Best1O88870 Mir7016-201ENSMUST00000184308 72 ntBASIC2.03□□□□□ -2.08
Best1O88870 Gm44325-201ENSMUST00000196757 77 ntBASIC2.03□□□□□ -2.08
Best1O88870 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.03□□□□□ -2.08
Best1O88870 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.03□□□□□ -2.08
Best1O88870 Mir34a-201ENSMUST00000083559 102 ntBASIC2.03□□□□□ -2.08
Best1O88870 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Best1O88870 Gm22586-201ENSMUST00000157507 122 ntBASIC2.02□□□□□ -2.09
Best1O88870 Gm26345-201ENSMUST00000157534 120 ntBASIC2.02□□□□□ -2.09
Best1O88870 Gm25015-201ENSMUST00000158400 128 ntBASIC2.02□□□□□ -2.09
Best1O88870 Mir1931-201ENSMUST00000158589 119 ntBASIC2.02□□□□□ -2.09
Best1O88870 Gm23813-201ENSMUST00000175153 77 ntBASIC2.02□□□□□ -2.09
Best1O88870 Gm44384-201ENSMUST00000200208 114 ntBASIC2.02□□□□□ -2.09
Best1O88870 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Best1O88870 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Best1O88870 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.01□□□□□ -2.09
Best1O88870 Snord89-201ENSMUST00000104516 110 ntBASIC2.01□□□□□ -2.09
Best1O88870 Mir3096-201ENSMUST00000116685 71 ntBASIC2.01□□□□□ -2.09
Best1O88870 Gm22082-201ENSMUST00000157587 161 ntBASIC2.01□□□□□ -2.09
Best1O88870 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.01□□□□□ -2.09
Best1O88870 Gm22264-201ENSMUST00000178200 107 ntBASIC2.01□□□□□ -2.09
Best1O88870 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.01□□□□□ -2.09
Best1O88870 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Best1O88870 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2□□□□□ -2.09
Best1O88870 Gm24640-201ENSMUST00000116949 126 ntBASIC2□□□□□ -2.09
Best1O88870 Gm22626-201ENSMUST00000116990 126 ntBASIC2□□□□□ -2.09
Best1O88870 Gm14536-201ENSMUST00000118324 138 ntBASIC2□□□□□ -2.09
Best1O88870 Gm15027-201ENSMUST00000120922 138 ntBASIC2□□□□□ -2.09
Best1O88870 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2□□□□□ -2.09
Best1O88870 Gm23901-201ENSMUST00000157570 107 ntBASIC2□□□□□ -2.09
Best1O88870 Gm25223-201ENSMUST00000158200 110 ntBASIC2□□□□□ -2.09
Best1O88870 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2□□□□□ -2.09
Best1O88870 Gm24761-201ENSMUST00000179589 127 ntBASIC2□□□□□ -2.09
Best1O88870 Gm24488-201ENSMUST00000179934 127 ntBASIC2□□□□□ -2.09
Best1O88870 Gm25701-201ENSMUST00000179988 127 ntBASIC2□□□□□ -2.09
Best1O88870 Gm26431-201ENSMUST00000180199 127 ntBASIC2□□□□□ -2.09
Best1O88870 Gm27443-201ENSMUST00000184660 98 ntBASIC2□□□□□ -2.09
Best1O88870 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2□□□□□ -2.09
Best1O88870 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Best1O88870 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Best1O88870 Gm12771-201ENSMUST00000120246 135 ntBASIC1.99□□□□□ -2.09
Best1O88870 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm16328-201ENSMUST00000126985 196 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm26482-201ENSMUST00000158015 62 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm23898-201ENSMUST00000158111 103 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Best1O88870 Gm26426-201ENSMUST00000177866 123 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm26060-201ENSMUST00000180094 123 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm27585-201ENSMUST00000183717 199 ntBASIC1.99□□□□□ -2.09
Best1O88870 Mir6901-201ENSMUST00000185062 62 ntBASIC1.99□□□□□ -2.09
Best1O88870 Mir7118-201ENSMUST00000197760 61 ntBASIC1.99□□□□□ -2.09
Best1O88870 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm25796-201ENSMUST00000082645 163 ntBASIC1.99□□□□□ -2.09
Best1O88870 Gm24375-201ENSMUST00000104397 132 ntBASIC1.98□□□□□ -2.09
Best1O88870 Mir873a-201ENSMUST00000104863 77 ntBASIC1.98□□□□□ -2.09
Best1O88870 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.98□□□□□ -2.09
Best1O88870 Gm22228-201ENSMUST00000157364 101 ntBASIC1.98□□□□□ -2.09
Best1O88870 Gm25654-201ENSMUST00000158467 88 ntBASIC1.98□□□□□ -2.09
Best1O88870 Gm23113-201ENSMUST00000158477 99 ntBASIC1.98□□□□□ -2.09
Best1O88870 Gm28409-201ENSMUST00000187064 103 ntBASIC1.98□□□□□ -2.09
Best1O88870 Gm43602-201ENSMUST00000196772 300 ntBASIC1.98□□□□□ -2.09
Best1O88870 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.98□□□□□ -2.09
Best1O88870 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Best1O88870 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.98□□□□□ -2.09
Best1O88870 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Best1O88870 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.97□□□□□ -2.09
Best1O88870 Gm23542-201ENSMUST00000158208 96 ntBASIC1.97□□□□□ -2.09
Best1O88870 Mir6997-201ENSMUST00000184313 71 ntBASIC1.97□□□□□ -2.09
Best1O88870 Mir7232-201ENSMUST00000197929 74 ntBASIC1.97□□□□□ -2.09
Best1O88870 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.97□□□□□ -2.09
Best1O88870 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.97□□□□□ -2.09
Best1O88870 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Best1O88870 Gm22494-201ENSMUST00000104495 128 ntBASIC1.96□□□□□ -2.1
Best1O88870 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm23718-201ENSMUST00000157350 307 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm23419-201ENSMUST00000175523 84 ntBASIC1.96□□□□□ -2.1
Best1O88870 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm22686-201ENSMUST00000082847 100 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm25697-201ENSMUST00000082902 98 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.96□□□□□ -2.1
Best1O88870 Gm25068-201ENSMUST00000103895 110 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm23655-201ENSMUST00000122627 105 ntBASIC1.95□□□□□ -2.1
Best1O88870 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm25460-201ENSMUST00000157954 127 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.95□□□□□ -2.1
Best1O88870 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.95□□□□□ -2.1
Best1O88870 Mir7014-201ENSMUST00000183853 63 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm43512-201ENSMUST00000198495 176 ntBASIC1.95□□□□□ -2.1
Best1O88870 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm22306-201ENSMUST00000082692 107 ntBASIC1.95□□□□□ -2.1
Best1O88870 Snord82-201ENSMUST00000082889 70 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm25482-201ENSMUST00000083225 107 ntBASIC1.95□□□□□ -2.1
Best1O88870 Mir30d-201ENSMUST00000083503 82 ntBASIC1.95□□□□□ -2.1
Best1O88870 Mir146-201ENSMUST00000083667 65 ntBASIC1.95□□□□□ -2.1
Best1O88870 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.94□□□□□ -2.1
Best1O88870 Gm22195-201ENSMUST00000116861 108 ntBASIC1.94□□□□□ -2.1
Best1O88870 Gm14838-201ENSMUST00000118913 248 ntBASIC1.94□□□□□ -2.1
Best1O88870 Gm26279-201ENSMUST00000157095 102 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms