Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Gm24768-201ENSMUST00000158512 94 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Gm44923-201ENSMUST00000206673 85 ntBASIC-0.31□□□□□ -2.46
DffaO54786 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Snord85-201ENSMUST00000083262 73 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Mir350-201ENSMUST00000083639 99 ntBASIC-0.31□□□□□ -2.46
DffaO54786 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-0.32□□□□□ -2.46
DffaO54786 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm38268-201ENSMUST00000195813 193 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.32□□□□□ -2.46
DffaO54786 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
DffaO54786 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm44392-201ENSMUST00000196758 115 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm44615-201ENSMUST00000206548 358 ntBASIC-0.33□□□□□ -2.46
DffaO54786 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.33□□□□□ -2.46
DffaO54786 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.33□□□□□ -2.46
DffaO54786 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
DffaO54786 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.34□□□□□ -2.46
DffaO54786 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
DffaO54786 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
DffaO54786 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.35□□□□□ -2.47
DffaO54786 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
DffaO54786 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Mir496b-201ENSMUST00000184935 113 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Mir191-201ENSMUST00000196210 74 ntBASIC-0.36□□□□□ -2.47
DffaO54786 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Gm25404-201ENSMUST00000082970 107 ntBASIC-0.36□□□□□ -2.47
DffaO54786 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.37□□□□□ -2.47
DffaO54786 Mir214-201ENSMUST00000083582 110 ntBASIC-0.37□□□□□ -2.47
DffaO54786 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
DffaO54786 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm24198-201ENSMUST00000157812 108 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
DffaO54786 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.38□□□□□ -2.47
DffaO54786 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.39□□□□□ -2.47
DffaO54786 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-0.39□□□□□ -2.47
DffaO54786 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.4□□□□□ -2.47
DffaO54786 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.4□□□□□ -2.47
DffaO54786 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.4□□□□□ -2.47
DffaO54786 Gm24517-201ENSMUST00000122560 107 ntBASIC-0.4□□□□□ -2.47
DffaO54786 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms