Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm23130-201ENSMUST00000104252 74 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm9059-201ENSMUST00000118319 183 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm25884-201ENSMUST00000157782 62 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm44960-201ENSMUST00000207403 141 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 DQ267101-201ENSMUST00000082562 73 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm13720-201ENSMUST00000120741 196 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm22308-201ENSMUST00000177609 107 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm25596-201ENSMUST00000178368 107 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm22166-201ENSMUST00000178419 121 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm23288-201ENSMUST00000179213 121 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm36956-201ENSMUST00000193830 214 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm24256-201ENSMUST00000083696 84 ntBASIC0.4□□□□□ -2.35
Chd3B1AR17 Gm25507-201ENSMUST00000116981 144 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm12255-201ENSMUST00000117184 284 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm11386-201ENSMUST00000117761 347 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm22522-201ENSMUST00000158271 151 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm27943-201ENSMUST00000184844 116 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm18213-201ENSMUST00000207850 178 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm34783-201ENSMUST00000209159 303 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Chd3B1AR17 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm25991-201ENSMUST00000102439 99 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm42855-201ENSMUST00000197388 253 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm22685-201ENSMUST00000082848 106 ntBASIC0.39□□□□□ -2.35
Chd3B1AR17 Gm14922-201ENSMUST00000121131 163 ntBASIC0.38□□□□□ -2.35
Chd3B1AR17 Gm14846-201ENSMUST00000121868 216 ntBASIC0.38□□□□□ -2.35
Chd3B1AR17 Gm25486-201ENSMUST00000158726 63 ntBASIC0.38□□□□□ -2.35
Chd3B1AR17 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Chd3B1AR17 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.38□□□□□ -2.35
Chd3B1AR17 Gm24468-201ENSMUST00000104489 104 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm14884-201ENSMUST00000120456 196 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm23672-201ENSMUST00000157471 107 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm28921-201ENSMUST00000190219 378 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Mir155-201ENSMUST00000083463 65 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm22771-201ENSMUST00000104449 91 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm15719-201ENSMUST00000120619 635 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm17148-201ENSMUST00000164702 249 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm23660-201ENSMUST00000178362 79 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm24088-201ENSMUST00000179100 79 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Chd3B1AR17 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm24355-201ENSMUST00000082858 122 ntBASIC0.37□□□□□ -2.35
Chd3B1AR17 Gm11334-201ENSMUST00000121969 156 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm24191-201ENSMUST00000157977 122 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm38280-201ENSMUST00000192610 158 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm43432-201ENSMUST00000196352 121 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm42719-201ENSMUST00000197393 355 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm45402-201ENSMUST00000211796 223 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm26326-201ENSMUST00000083070 129 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Mir670-201ENSMUST00000102380 100 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm11859-201ENSMUST00000118099 455 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm26424-201ENSMUST00000122530 104 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm25559-201ENSMUST00000157182 74 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm28597-201ENSMUST00000187664 666 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Gm22294-201ENSMUST00000083308 104 ntBASIC0.36□□□□□ -2.35
Chd3B1AR17 Mir710-201ENSMUST00000102088 110 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm11794-201ENSMUST00000119446 237 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm27717-201ENSMUST00000183933 151 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm5001-201ENSMUST00000204361 331 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm43898-201ENSMUST00000204456 424 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.35□□□□□ -2.35
Chd3B1AR17 Gm22759-201ENSMUST00000102276 96 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Gm22656-201ENSMUST00000104199 171 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Gm15213-201ENSMUST00000122098 216 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Gm22983-201ENSMUST00000158308 104 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Gm23515-201ENSMUST00000082829 107 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Snord33-201ENSMUST00000083694 84 ntBASIC0.34□□□□□ -2.35
Chd3B1AR17 Gm22796-201ENSMUST00000157234 106 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Gm26152-201ENSMUST00000157427 101 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Gm23996-201ENSMUST00000158062 131 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Gm28661-201ENSMUST00000188231 681 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Gm28288-201ENSMUST00000191019 214 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Mir6915-201ENSMUST00000198839 69 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Mir490-201ENSMUST00000093567 84 ntBASIC0.34□□□□□ -2.36
Chd3B1AR17 Gm25284-201ENSMUST00000180345 141 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm44396-201ENSMUST00000199843 114 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm44811-201ENSMUST00000209120 228 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms