Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.99□□□□□ -2.25
CtcflA2APF3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CtcflA2APF3 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.99□□□□□ -2.25
CtcflA2APF3 Gm22780-201ENSMUST00000104084 132 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm26479-201ENSMUST00000122620 106 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm23982-201ENSMUST00000157141 106 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm22216-201ENSMUST00000157557 114 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm26089-201ENSMUST00000157898 107 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Mir1951-201ENSMUST00000157981 89 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm26029-201ENSMUST00000158659 132 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm25069-201ENSMUST00000175238 86 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm29014-201ENSMUST00000191422 326 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Snora41-201ENSMUST00000082668 132 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm25038-201ENSMUST00000082928 130 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Gm23345-201ENSMUST00000083817 150 ntBASIC0.98□□□□□ -2.25
CtcflA2APF3 Mir544-201ENSMUST00000103813 78 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Mir669i-201ENSMUST00000117007 127 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm14919-201ENSMUST00000120839 390 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm23640-201ENSMUST00000157860 104 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Mir7665-201ENSMUST00000184907 63 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm26495-201ENSMUST00000083152 137 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm24252-201ENSMUST00000083700 132 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Gm23039-201ENSMUST00000083870 161 ntBASIC0.97□□□□□ -2.25
CtcflA2APF3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CtcflA2APF3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm15379-201ENSMUST00000121224 648 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm23182-201ENSMUST00000158688 135 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm2962-201ENSMUST00000159266 336 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm38060-201ENSMUST00000194822 464 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.96□□□□□ -2.26
CtcflA2APF3 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm46993-201ENSMUST00000220708 259 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm26497-201ENSMUST00000083146 107 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm24764-201ENSMUST00000083686 199 ntBASIC0.96□□□□□ -2.26
CtcflA2APF3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CtcflA2APF3 Gm25875-201ENSMUST00000104323 107 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm23987-201ENSMUST00000117039 129 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm22984-201ENSMUST00000122751 122 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm25825-201ENSMUST00000157091 124 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm23536-201ENSMUST00000157541 134 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm26038-201ENSMUST00000158151 106 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm22118-201ENSMUST00000175593 171 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm27521-201ENSMUST00000184022 64 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.95□□□□□ -2.26
CtcflA2APF3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm6105-201ENSMUST00000200580 624 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm43911-201ENSMUST00000203097 76 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CtcflA2APF3 Gm23214-201ENSMUST00000122716 157 ntBASIC0.94□□□□□ -2.26
CtcflA2APF3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.94□□□□□ -2.26
CtcflA2APF3 Gm44325-201ENSMUST00000196757 77 ntBASIC0.94□□□□□ -2.26
CtcflA2APF3 Gm9795-201ENSMUST00000062156 693 ntBASIC0.94□□□□□ -2.26
CtcflA2APF3 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.94□□□□□ -2.26
CtcflA2APF3 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm23705-201ENSMUST00000104370 130 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm23194-201ENSMUST00000158813 105 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Mir6381-201ENSMUST00000183426 87 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm44373-201ENSMUST00000196112 169 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm45313-201ENSMUST00000210584 178 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm22306-201ENSMUST00000082692 107 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Snord1a-201ENSMUST00000083160 74 ntBASIC0.93□□□□□ -2.26
CtcflA2APF3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CtcflA2APF3 Gm22545-201ENSMUST00000104350 132 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm16032-201ENSMUST00000118534 168 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm24595-201ENSMUST00000122501 110 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm23636-201ENSMUST00000175070 95 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm27419-201ENSMUST00000184576 109 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm43406-201ENSMUST00000200356 334 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm24204-201ENSMUST00000082950 107 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
CtcflA2APF3 Gm10222-201ENSMUST00000088336 294 ntBASIC0.92□□□□□ -2.26
CtcflA2APF3 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.91□□□□□ -2.26
CtcflA2APF3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.91□□□□□ -2.26
CtcflA2APF3 Gm13560-201ENSMUST00000121865 329 ntBASIC0.91□□□□□ -2.26
CtcflA2APF3 Gm23101-201ENSMUST00000157550 137 ntBASIC0.91□□□□□ -2.26
CtcflA2APF3 Mir3061-201ENSMUST00000175129 91 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms