Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.47□□□□□ -2.33
Trav12-2A0N8N6 Gm24042-201ENSMUST00000083114 103 ntBASIC0.47□□□□□ -2.33
Trav12-2A0N8N6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.47□□□□□ -2.33
Trav12-2A0N8N6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Gm23759-201ENSMUST00000158351 268 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Mir1961-201ENSMUST00000158643 112 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Gm43472-201ENSMUST00000200175 154 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Gm22248-201ENSMUST00000082482 150 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Gm22809-201ENSMUST00000082743 156 ntBASIC0.46□□□□□ -2.34
Trav12-2A0N8N6 Mir654-201ENSMUST00000104787 84 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Mir880-201ENSMUST00000104809 78 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm22598-201ENSMUST00000157600 127 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm22555-201ENSMUST00000157801 62 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm24499-201ENSMUST00000158446 104 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm25643-201ENSMUST00000158874 103 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Snora24-201ENSMUST00000174989 130 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm25949-201ENSMUST00000175333 114 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm25450-201ENSMUST00000179144 107 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm25078-201ENSMUST00000082530 107 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm26056-201ENSMUST00000083043 104 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.45□□□□□ -2.34
Trav12-2A0N8N6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm14536-201ENSMUST00000118324 138 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm15027-201ENSMUST00000120922 138 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm13560-201ENSMUST00000121865 329 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm25838-201ENSMUST00000158920 120 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm10105-201ENSMUST00000184601 270 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Mir6540-201ENSMUST00000184886 108 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm36946-201ENSMUST00000192706 435 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm43624-201ENSMUST00000197368 180 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Gm43367-201ENSMUST00000199986 625 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.44□□□□□ -2.34
Trav12-2A0N8N6 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm24595-201ENSMUST00000122501 110 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm25781-201ENSMUST00000122527 84 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm22883-201ENSMUST00000157376 106 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm22200-201ENSMUST00000158614 67 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm23182-201ENSMUST00000158688 135 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm24323-201ENSMUST00000175342 77 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm43238-201ENSMUST00000196463 359 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Trav12-2A0N8N6 Gm23492-201ENSMUST00000116837 115 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm22482-201ENSMUST00000122563 359 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm24847-201ENSMUST00000158032 108 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm23113-201ENSMUST00000158477 99 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm22945-201ENSMUST00000158557 157 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Mir1931-201ENSMUST00000158589 119 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm23194-201ENSMUST00000158813 105 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm25671-201ENSMUST00000178612 105 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm23307-201ENSMUST00000179167 105 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm25286-201ENSMUST00000179790 105 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm6105-201ENSMUST00000200580 624 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm44948-201ENSMUST00000209050 149 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm34783-201ENSMUST00000209159 303 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.42□□□□□ -2.34
Trav12-2A0N8N6 Gm13711-201ENSMUST00000119708 453 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm14574-201ENSMUST00000120644 279 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm25901-201ENSMUST00000158494 130 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm44352-201ENSMUST00000196358 110 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.41□□□□□ -2.34
Trav12-2A0N8N6 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trav12-2A0N8N6 Gm22163-201ENSMUST00000158408 135 ntBASIC0.4□□□□□ -2.35
Trav12-2A0N8N6 Gm7258-201ENSMUST00000179317 300 ntBASIC0.4□□□□□ -2.35
Trav12-2A0N8N6 Gm44063-201ENSMUST00000203307 376 ntBASIC0.4□□□□□ -2.35
Trav12-2A0N8N6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm12748-201ENSMUST00000120763 504 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm24909-201ENSMUST00000157290 280 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm28256-201ENSMUST00000188953 139 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm28559-201ENSMUST00000190532 139 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm25855-201ENSMUST00000082787 72 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Gm23039-201ENSMUST00000083870 161 ntBASIC0.39□□□□□ -2.35
Trav12-2A0N8N6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Trav12-2A0N8N6 Gm24375-201ENSMUST00000104397 132 ntBASIC0.38□□□□□ -2.35
Trav12-2A0N8N6 Gm14980-201ENSMUST00000121247 736 ntBASIC0.38□□□□□ -2.35
Trav12-2A0N8N6 Gm24630-201ENSMUST00000122768 106 ntBASIC0.38□□□□□ -2.35
Trav12-2A0N8N6 Gm23605-201ENSMUST00000157255 127 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms