Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm26437-201ENSMUST00000082595 105 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.39□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.4□□□□□ -2.47
Trbv16A0A0B4J1H3 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Mir350-201ENSMUST00000083639 99 ntBASIC-0.41□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.42□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.44□□□□□ -2.48
Trbv16A0A0B4J1H3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Mir214-201ENSMUST00000083582 110 ntBASIC-0.45□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.46□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24517-201ENSMUST00000122560 107 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm25404-201ENSMUST00000082970 107 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.47□□□□□ -2.48
Trbv16A0A0B4J1H3 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm25044-201ENSMUST00000158603 104 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Mir496b-201ENSMUST00000184935 113 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Mir191-201ENSMUST00000196210 74 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm44392-201ENSMUST00000196758 115 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.48□□□□□ -2.49
Trbv16A0A0B4J1H3 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms