Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm5010-201ENSMUST00000213131 260 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 Gm25357-201ENSMUST00000082745 72 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 Snord118-201ENSMUST00000082965 135 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 Snora3-201ENSMUST00000083082 132 ntBASIC1.41□□□□□ -2.18
H2afb2S4R1M3 Gm26156-201ENSMUST00000116999 123 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm11936-201ENSMUST00000118323 160 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Mir1951-201ENSMUST00000157981 89 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm24510-201ENSMUST00000174965 94 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm28912-201ENSMUST00000189001 234 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm37693-201ENSMUST00000194562 234 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm43427-201ENSMUST00000198188 331 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.4□□□□□ -2.19
H2afb2S4R1M3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
H2afb2S4R1M3 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Mir107-201ENSMUST00000083660 87 ntBASIC1.4□□□□□ -2.19
H2afb2S4R1M3 Gm26135-201ENSMUST00000101993 72 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm23705-201ENSMUST00000104370 130 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm14846-201ENSMUST00000121868 216 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm15214-201ENSMUST00000122155 470 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm25720-201ENSMUST00000157503 105 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm25184-201ENSMUST00000157753 163 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm24851-201ENSMUST00000158028 103 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm22768-201ENSMUST00000158366 153 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm25362-201ENSMUST00000158854 105 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Snord50b-201ENSMUST00000178497 72 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm27402-201ENSMUST00000183890 120 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Mir7225-201ENSMUST00000184178 54 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm29022-201ENSMUST00000190702 225 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
H2afb2S4R1M3 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.39□□□□□ -2.19
H2afb2S4R1M3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm23390-201ENSMUST00000157393 106 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm24006-201ENSMUST00000158462 132 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Mir6419-201ENSMUST00000184784 113 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm22421-201ENSMUST00000083058 107 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Mir155-201ENSMUST00000083463 65 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Snora33-201ENSMUST00000093556 129 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
H2afb2S4R1M3 Mir293-201ENSMUST00000104841 80 ntBASIC1.37□□□□□ -2.19
H2afb2S4R1M3 Gm23101-201ENSMUST00000157550 137 ntBASIC1.37□□□□□ -2.19
H2afb2S4R1M3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.37□□□□□ -2.19
H2afb2S4R1M3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.37□□□□□ -2.19
H2afb2S4R1M3 Gm34139-201ENSMUST00000196166 294 ntBASIC1.37□□□□□ -2.19
H2afb2S4R1M3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm3788-201ENSMUST00000119949 136 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm24595-201ENSMUST00000122501 110 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm26482-201ENSMUST00000158015 62 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Mir6388-201ENSMUST00000184417 75 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm44384-201ENSMUST00000200208 114 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm44563-201ENSMUST00000207958 178 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Snora19-201ENSMUST00000082962 132 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm23658-201ENSMUST00000083233 132 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Gm24453-201ENSMUST00000083346 76 ntBASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
H2afb2S4R1M3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
H2afb2S4R1M3 Mir301b-201ENSMUST00000102333 97 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm26339-201ENSMUST00000102368 99 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm24835-201ENSMUST00000116777 111 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm14937-201ENSMUST00000119709 208 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm15861-201ENSMUST00000120979 339 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm14491-201ENSMUST00000121919 199 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm23656-201ENSMUST00000122626 112 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm23670-201ENSMUST00000157469 119 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm25884-201ENSMUST00000157782 62 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm27579-201ENSMUST00000158113 63 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm22433-201ENSMUST00000158550 142 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm24668-201ENSMUST00000158935 104 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Mir3086-201ENSMUST00000175072 87 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm23002-201ENSMUST00000179221 107 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.35□□□□□ -2.19
H2afb2S4R1M3 Gm6105-201ENSMUST00000200580 624 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 152.2 ms