Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Trbv7-201ENSMUST00000193339 402 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Mir378a-201ENSMUST00000198300 66 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.51□□□□□ -2.17
H2afb1S4R1E0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Snora3-201ENSMUST00000083082 132 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Mir155-201ENSMUST00000083463 65 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Mir322-201ENSMUST00000083484 95 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Mir293-201ENSMUST00000104841 80 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm14491-201ENSMUST00000121919 199 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm23466-201ENSMUST00000157133 106 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm23390-201ENSMUST00000157393 106 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm22082-201ENSMUST00000157587 161 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm23542-201ENSMUST00000158208 96 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm22075-201ENSMUST00000158599 192 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm22665-201ENSMUST00000158720 275 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Gm6105-201ENSMUST00000200580 624 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Snord7-201ENSMUST00000083781 97 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
H2afb1S4R1E0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Mir541-201ENSMUST00000102097 90 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Mir223-201ENSMUST00000102112 110 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm25279-201ENSMUST00000122608 133 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm22264-201ENSMUST00000178200 107 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm37715-201ENSMUST00000193206 235 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Mir146-201ENSMUST00000083667 65 ntBASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
H2afb1S4R1E0 Gm22145-201ENSMUST00000157396 148 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm25884-201ENSMUST00000157782 62 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm2962-201ENSMUST00000159266 336 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Mir3057-201ENSMUST00000175040 91 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm25035-201ENSMUST00000175414 77 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Mir6419-201ENSMUST00000184784 113 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm27959-201ENSMUST00000185172 111 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Mir7116-201ENSMUST00000195956 70 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm22683-201ENSMUST00000082854 137 ntBASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
H2afb1S4R1E0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm15162-201ENSMUST00000119325 283 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm24729-201ENSMUST00000158225 137 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm23258-201ENSMUST00000158319 106 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm25654-201ENSMUST00000158467 88 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Mir6388-201ENSMUST00000184417 75 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Gm45150-201ENSMUST00000206051 467 ntBASIC1.47□□□□□ -2.17
H2afb1S4R1E0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
H2afb1S4R1E0 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm26339-201ENSMUST00000102368 99 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm14937-201ENSMUST00000119709 208 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm15861-201ENSMUST00000120979 339 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm12815-201ENSMUST00000121737 135 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm23656-201ENSMUST00000122626 112 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm25390-201ENSMUST00000157341 103 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Snord13-201ENSMUST00000157627 104 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm24668-201ENSMUST00000158935 104 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Mir5118-201ENSMUST00000175551 67 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm20630-201ENSMUST00000177387 551 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm23571-201ENSMUST00000180073 127 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Mir7068-201ENSMUST00000183439 74 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Mir6997-201ENSMUST00000184313 71 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm29014-201ENSMUST00000191422 326 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm16976-205ENSMUST00000227324 226 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm24762-201ENSMUST00000083689 104 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.46□□□□□ -2.18
H2afb1S4R1E0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm24594-201ENSMUST00000122502 99 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm23892-201ENSMUST00000158105 130 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm27585-201ENSMUST00000183717 199 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm29262-201ENSMUST00000190084 196 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Gm45116-201ENSMUST00000207392 275 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Mir221-201ENSMUST00000083488 95 ntBASIC1.45□□□□□ -2.18
H2afb1S4R1E0 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm13560-201ENSMUST00000121865 329 ntBASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm22279-201ENSMUST00000157200 93 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 196.6 ms