Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mir344-2-201ENSMUST00000175446 80 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm25253-201ENSMUST00000179958 107 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm28740-201ENSMUST00000186142 215 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm43487-201ENSMUST00000200331 1031 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Gm24634-201ENSMUST00000158672 107 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Snord116l14-201ENSMUST00000179875 94 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Gm28196-201ENSMUST00000187719 640 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Gm23442-201ENSMUST00000082919 134 ntBASIC-1.07□□□□□ -2.58
Scn11aQ9R053 Gm12106-201ENSMUST00000116006 1200 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm23898-201ENSMUST00000158111 103 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm38364-201ENSMUST00000191814 179 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm25513-201ENSMUST00000083861 162 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm23118-201ENSMUST00000122657 187 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm26415-201ENSMUST00000157673 292 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm22076-201ENSMUST00000158601 84 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Mir1936-201ENSMUST00000158699 93 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
Scn11aQ9R053 AC133654.1-201ENSMUST00000228411 672 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm23453-201ENSMUST00000083326 106 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Gm23848-201ENSMUST00000083826 106 ntBASIC-1.08□□□□□ -2.58
Scn11aQ9R053 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-1.09□□□□□ -2.58
Scn11aQ9R053 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Gm44125-201ENSMUST00000203068 448 ntBASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Mir96-201ENSMUST00000083652 106 ntBASIC-1.09□□□□□ -2.58
Scn11aQ9R053 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-1.09□□□□□ -2.58
Scn11aQ9R053 Gm18971-201ENSMUST00000197240 374 ntBASIC-1.1□□□□□ -2.59
Scn11aQ9R053 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-1.1□□□□□ -2.59
Scn11aQ9R053 Gm22283-201ENSMUST00000082556 161 ntBASIC-1.1□□□□□ -2.59
Scn11aQ9R053 Gm25671-201ENSMUST00000178612 105 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm23307-201ENSMUST00000179167 105 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm25286-201ENSMUST00000179790 105 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Mir880-201ENSMUST00000104809 78 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm25882-201ENSMUST00000157784 85 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm25328-201ENSMUST00000175013 107 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm36953-201ENSMUST00000195295 268 ntBASIC-1.11□□□□□ -2.59
Scn11aQ9R053 Gm25878-201ENSMUST00000104327 93 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Gm13475-201ENSMUST00000119290 234 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Mir3964-201ENSMUST00000174898 74 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 AC154552.5-201ENSMUST00000222352 207 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Gm24625-201ENSMUST00000082622 130 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.12□□□□□ -2.59
Scn11aQ9R053 Gm24592-201ENSMUST00000122505 106 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Gm24853-201ENSMUST00000158026 121 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Gm27428-201ENSMUST00000184289 110 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Mir721-201ENSMUST00000200230 88 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Gm37630-201ENSMUST00000194210 1456 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 AC159246.1-201ENSMUST00000214478 249 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 AC166358.10-201ENSMUST00000220556 144 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 AC156574.2-201ENSMUST00000228023 282 ntBASIC-1.13□□□□□ -2.59
Scn11aQ9R053 Gm22935-201ENSMUST00000103960 104 ntBASIC-1.14□□□□□ -2.59
Scn11aQ9R053 Gm16307-201ENSMUST00000161269 210 ntBASIC-1.14□□□□□ -2.59
Scn11aQ9R053 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.14□□□□□ -2.59
Scn11aQ9R053 AC157476.1-201ENSMUST00000215555 169 ntBASIC-1.14□□□□□ -2.59
Scn11aQ9R053 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.14□□□□□ -2.59
Scn11aQ9R053 Gm15175-201ENSMUST00000117629 132 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm24277-201ENSMUST00000158661 104 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm28414-201ENSMUST00000190111 294 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm43993-201ENSMUST00000203972 247 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm23301-201ENSMUST00000082713 65 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm22753-201ENSMUST00000083657 107 ntBASIC-1.15□□□□□ -2.59
Scn11aQ9R053 Gm23584-201ENSMUST00000157655 129 ntBASIC-1.16□□□□□ -2.59
Scn11aQ9R053 Gm23763-201ENSMUST00000158345 60 ntBASIC-1.16□□□□□ -2.59
Scn11aQ9R053 Gm24880-201ENSMUST00000158776 85 ntBASIC-1.16□□□□□ -2.59
Scn11aQ9R053 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.16□□□□□ -2.59
Scn11aQ9R053 Gm22656-201ENSMUST00000104199 171 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Gm24884-201ENSMUST00000158784 119 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Gm22118-201ENSMUST00000175593 171 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-1.16□□□□□ -2.6
Scn11aQ9R053 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Snora20-201ENSMUST00000082703 128 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Mir377-201ENSMUST00000083504 68 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Gm22577-201ENSMUST00000083731 109 ntBASIC-1.16□□□□□ -2.6
Scn11aQ9R053 Gm23535-201ENSMUST00000157542 106 ntBASIC-1.17□□□□□ -2.6
Scn11aQ9R053 Gm37750-201ENSMUST00000193563 129 ntBASIC-1.17□□□□□ -2.6
Scn11aQ9R053 Gm44282-201ENSMUST00000203199 190 ntBASIC-1.17□□□□□ -2.6
Scn11aQ9R053 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-1.17□□□□□ -2.6
Scn11aQ9R053 CT030684.2-201ENSMUST00000228946 826 ntBASIC-1.17□□□□□ -2.6
Scn11aQ9R053 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 Gm24005-201ENSMUST00000158459 296 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 Gm22888-201ENSMUST00000158640 77 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 AC123656.2-201ENSMUST00000226726 227 ntBASIC-1.18□□□□□ -2.6
Scn11aQ9R053 Gm23169-201ENSMUST00000157157 112 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm22281-201ENSMUST00000157198 103 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 152.2 ms