Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm24204-201ENSMUST00000082950 107 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Mir221-201ENSMUST00000083488 95 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm10222-201ENSMUST00000088336 294 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.59□□□□□ -2.16
Cpsf3Q9QXK7 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm25541-201ENSMUST00000116888 126 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm22279-201ENSMUST00000157200 93 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm22099-201ENSMUST00000157925 123 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Mir1951-201ENSMUST00000157981 89 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm27747-201ENSMUST00000184707 85 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm19855-201ENSMUST00000210145 249 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm25204-201ENSMUST00000082843 106 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Gm23451-201ENSMUST00000083328 122 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.58□□□□□ -2.16
Cpsf3Q9QXK7 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Gm26080-201ENSMUST00000104069 131 ntBASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Gm33866-201ENSMUST00000196911 289 ntBASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Mir3087-201ENSMUST00000199405 56 ntBASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Gm22248-201ENSMUST00000082482 150 ntBASIC1.57□□□□□ -2.16
Cpsf3Q9QXK7 Gm14792-201ENSMUST00000119725 258 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Gm27493-201ENSMUST00000184128 78 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.56□□□□□ -2.16
Cpsf3Q9QXK7 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm25111-201ENSMUST00000116686 147 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm14001-201ENSMUST00000118847 247 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm11388-201ENSMUST00000120908 159 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm24366-201ENSMUST00000175383 86 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm44320-201ENSMUST00000199276 86 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Gm16976-205ENSMUST00000227324 226 ntBASIC1.55□□□□□ -2.16
Cpsf3Q9QXK7 Mir653-201ENSMUST00000102402 85 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm17113-201ENSMUST00000170118 171 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm22450-201ENSMUST00000179641 107 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm25473-201ENSMUST00000180191 107 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Mir6540-201ENSMUST00000184886 108 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm37889-201ENSMUST00000194174 251 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm38019-201ENSMUST00000195133 380 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm43563-201ENSMUST00000196761 198 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm6105-201ENSMUST00000200580 624 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm24856-201ENSMUST00000082809 107 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm26071-201ENSMUST00000083261 107 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm24521-201ENSMUST00000083958 107 ntBASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cpsf3Q9QXK7 Gm23836-201ENSMUST00000104434 129 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm14883-201ENSMUST00000120179 157 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm15379-201ENSMUST00000121224 648 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm24909-201ENSMUST00000157290 280 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm23122-201ENSMUST00000157645 103 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm25664-201ENSMUST00000157697 107 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm22097-201ENSMUST00000157929 278 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm24225-201ENSMUST00000158825 98 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm26287-201ENSMUST00000158887 81 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm28537-201ENSMUST00000189026 315 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm29631-201ENSMUST00000191065 315 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm44962-201ENSMUST00000206460 279 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm44959-201ENSMUST00000209127 231 ntBASIC1.53□□□□□ -2.16
Cpsf3Q9QXK7 Gm25992-201ENSMUST00000102437 109 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm12797-201ENSMUST00000118645 273 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm23170-201ENSMUST00000157158 106 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm25884-201ENSMUST00000157782 62 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm2962-201ENSMUST00000159266 336 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Mir7009-201ENSMUST00000184519 64 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm28794-201ENSMUST00000185276 136 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm24038-201ENSMUST00000082872 159 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm23970-201ENSMUST00000083319 107 ntBASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.52□□□□□ -2.17
Cpsf3Q9QXK7 Gm15214-201ENSMUST00000122155 470 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm25423-201ENSMUST00000157609 107 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm29613-201ENSMUST00000185846 313 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm29544-201ENSMUST00000188860 313 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm28921-201ENSMUST00000190219 378 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm28808-201ENSMUST00000190978 313 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm37089-201ENSMUST00000195616 129 ntBASIC1.51□□□□□ -2.17
Cpsf3Q9QXK7 Gm23101-201ENSMUST00000157550 137 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Gm24392-201ENSMUST00000158136 103 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Gm24667-201ENSMUST00000158938 103 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Gm25024-201ENSMUST00000179667 104 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Gm42719-201ENSMUST00000197393 355 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 173.6 ms