Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Mir201-201ENSMUST00000083470 66 ntBASIC2.37□□□□□ -2.03
Ldb3Q9JKS4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Ldb3Q9JKS4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm24375-201ENSMUST00000104397 132 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Mir466k-201ENSMUST00000116774 122 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm8260-201ENSMUST00000119230 353 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm24632-201ENSMUST00000122770 323 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm23434-201ENSMUST00000157179 100 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm26105-201ENSMUST00000157253 190 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm26411-201ENSMUST00000157668 107 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Mir6993-201ENSMUST00000184912 65 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm35736-201ENSMUST00000203681 313 ntBASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ldb3Q9JKS4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Mir878-201ENSMUST00000104680 78 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm14567-201ENSMUST00000117155 174 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm26084-201ENSMUST00000157903 104 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm27379-201ENSMUST00000183730 123 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm24030-201ENSMUST00000083931 164 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.35□□□□□ -2.03
Ldb3Q9JKS4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm24837-201ENSMUST00000158683 81 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm20718-201ENSMUST00000176058 259 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm27672-201ENSMUST00000183751 204 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm44358-201ENSMUST00000196301 98 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm44057-201ENSMUST00000204547 96 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm25409-201ENSMUST00000083764 131 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.34□□□□□ -2.03
Ldb3Q9JKS4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Ldb3Q9JKS4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.04
Ldb3Q9JKS4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm26081-201ENSMUST00000104068 132 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm26247-201ENSMUST00000116702 91 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm26091-201ENSMUST00000122704 82 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm22213-201ENSMUST00000157564 119 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm23504-201ENSMUST00000158988 95 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Mir6916-201ENSMUST00000184514 63 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm37081-201ENSMUST00000192034 196 ntBASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ldb3Q9JKS4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm11598-201ENSMUST00000119257 357 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm25153-201ENSMUST00000157118 156 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm23599-201ENSMUST00000157261 251 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Mir7013-201ENSMUST00000183540 72 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm43381-201ENSMUST00000198553 165 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm44223-201ENSMUST00000204854 114 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm23847-201ENSMUST00000083829 110 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ldb3Q9JKS4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm24122-201ENSMUST00000104107 132 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm22790-201ENSMUST00000157229 129 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm24691-201ENSMUST00000157762 140 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm23113-201ENSMUST00000158477 99 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm6788-201ENSMUST00000166459 270 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm27532-201ENSMUST00000183726 113 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm27527-201ENSMUST00000183903 99 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm37377-201ENSMUST00000191733 304 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm44491-201ENSMUST00000196794 96 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm22576-201ENSMUST00000083733 104 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Gm26175-201ENSMUST00000083794 131 ntBASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ldb3Q9JKS4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Mir682-201ENSMUST00000102281 96 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm25407-201ENSMUST00000104102 134 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm24670-201ENSMUST00000104154 132 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm14502-201ENSMUST00000118154 113 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm23644-201ENSMUST00000157856 77 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Rnu7-201ENSMUST00000158458 62 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm23090-201ENSMUST00000177331 78 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm27668-201ENSMUST00000184188 120 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Mir6405-201ENSMUST00000184584 124 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm27991-201ENSMUST00000184804 137 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm45452-201ENSMUST00000210905 177 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 Gm22306-201ENSMUST00000082692 107 ntBASIC2.3□□□□□ -2.04
Ldb3Q9JKS4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms