Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25949-201ENSMUST00000175333 114 ntBASIC0.57□□□□□ -2.32
Trem1Q9JKE2 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.57□□□□□ -2.32
Trem1Q9JKE2 Gm26329-201ENSMUST00000093723 110 ntBASIC0.57□□□□□ -2.32
Trem1Q9JKE2 Gm23142-201ENSMUST00000101848 105 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Gm26240-201ENSMUST00000101893 105 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Mir1961-201ENSMUST00000158643 112 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Mir7665-201ENSMUST00000184907 63 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Gm43472-201ENSMUST00000200175 154 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Gm24164-201ENSMUST00000093663 104 ntBASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trem1Q9JKE2 Gm22200-201ENSMUST00000158614 67 ntBASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Gm23967-201ENSMUST00000175062 78 ntBASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Mir6389-201ENSMUST00000183661 102 ntBASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Gm22302-201ENSMUST00000082657 106 ntBASIC0.55□□□□□ -2.32
Trem1Q9JKE2 Gm23766-201ENSMUST00000103894 80 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Gm24116-201ENSMUST00000103975 107 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Mir1951-201ENSMUST00000157981 89 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Gm24810-201ENSMUST00000175317 70 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Mir3079-201ENSMUST00000175428 90 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Mir7663-201ENSMUST00000183950 61 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Gm44320-201ENSMUST00000199276 86 ntBASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Trem1Q9JKE2 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm25377-201ENSMUST00000104334 129 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm13711-201ENSMUST00000119708 453 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm25715-201ENSMUST00000158627 125 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm27539-201ENSMUST00000184971 224 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Mir3569-201ENSMUST00000185080 58 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm28435-201ENSMUST00000185496 108 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm43432-201ENSMUST00000196352 121 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm22809-201ENSMUST00000082743 156 ntBASIC0.53□□□□□ -2.32
Trem1Q9JKE2 Gm25938-201ENSMUST00000104139 166 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm13560-201ENSMUST00000121865 329 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm22555-201ENSMUST00000157801 62 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm23760-201ENSMUST00000158350 116 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm20391-201ENSMUST00000174722 106 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm27898-201ENSMUST00000183987 80 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm36946-201ENSMUST00000192706 435 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Mir468-201ENSMUST00000197332 78 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Mir3087-201ENSMUST00000199405 56 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm43884-201ENSMUST00000204251 559 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm44811-201ENSMUST00000209120 228 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Gm25204-201ENSMUST00000082843 106 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Mir196b-201ENSMUST00000083509 85 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.52□□□□□ -2.33
Trem1Q9JKE2 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm23194-201ENSMUST00000158813 105 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm27326-201ENSMUST00000183504 95 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm43624-201ENSMUST00000197368 180 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm22248-201ENSMUST00000082482 150 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm23039-201ENSMUST00000083870 161 ntBASIC0.51□□□□□ -2.33
Trem1Q9JKE2 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm26274-201ENSMUST00000157103 321 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm24440-201ENSMUST00000157236 63 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm26484-201ENSMUST00000158018 106 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm24847-201ENSMUST00000158032 108 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm26022-201ENSMUST00000158663 108 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm23059-201ENSMUST00000158978 107 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm24512-201ENSMUST00000174963 65 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Snora24-201ENSMUST00000174989 130 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm24154-201ENSMUST00000175261 130 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm34015-201ENSMUST00000194908 451 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm43238-201ENSMUST00000196463 359 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm23851-201ENSMUST00000083831 103 ntBASIC0.5□□□□□ -2.33
Trem1Q9JKE2 Gm23022-201ENSMUST00000158768 180 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Gm23267-201ENSMUST00000178490 132 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Mir7050-201ENSMUST00000184636 60 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Mir7062-201ENSMUST00000185038 66 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Gm37337-201ENSMUST00000192601 993 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Gm6105-201ENSMUST00000200580 624 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.49□□□□□ -2.33
Trem1Q9JKE2 Gm26056-201ENSMUST00000083043 104 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms