Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm22945-201ENSMUST00000158557 157 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm25820-201ENSMUST00000198589 127 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm25825-201ENSMUST00000157091 124 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm5034-201ENSMUST00000199115 634 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm23377-201ENSMUST00000082943 126 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Mir448-201ENSMUST00000083516 112 ntBASIC-0.07□□□□□ -2.42
Trem3Q9JKE1 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Gm44458-201ENSMUST00000196594 143 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 AC154424.1-201ENSMUST00000225883 799 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.08□□□□□ -2.42
Trem3Q9JKE1 Gm25718-201ENSMUST00000158632 118 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 AC121844.1-201ENSMUST00000218706 137 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.09□□□□□ -2.42
Trem3Q9JKE1 Gm25274-201ENSMUST00000104296 135 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Snord82-201ENSMUST00000082889 70 ntBASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Trem3Q9JKE1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Mir6394-201ENSMUST00000184738 99 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Mir411-201ENSMUST00000083543 82 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.11□□□□□ -2.43
Trem3Q9JKE1 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.12□□□□□ -2.43
Trem3Q9JKE1 Snord98-201ENSMUST00000116819 65 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm25317-201ENSMUST00000116824 129 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm27668-201ENSMUST00000184188 120 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.13□□□□□ -2.43
Trem3Q9JKE1 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 AC124182.1-201ENSMUST00000227091 321 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Mir382-201ENSMUST00000083494 76 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Mir32-201ENSMUST00000083610 70 ntBASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
Trem3Q9JKE1 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm22447-201ENSMUST00000158155 92 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm24315-201ENSMUST00000177835 127 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm23410-201ENSMUST00000179967 107 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms