Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm18213-201ENSMUST00000207850 178 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm45543-201ENSMUST00000209327 88 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm22985-201ENSMUST00000122754 116 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm23232-201ENSMUST00000157300 105 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm22215-201ENSMUST00000157558 96 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm27656-201ENSMUST00000185055 80 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm37337-201ENSMUST00000192601 993 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 Gm44921-201ENSMUST00000205290 301 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.55□□□□□ -2.32
Lima1Q9ERG0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm24283-201ENSMUST00000104233 107 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm22791-201ENSMUST00000157232 145 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Mir6905-201ENSMUST00000184228 70 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm29014-201ENSMUST00000191422 326 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm38060-201ENSMUST00000194822 464 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm44473-201ENSMUST00000204039 152 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.54□□□□□ -2.32
Lima1Q9ERG0 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm22704-201ENSMUST00000083027 137 ntBASIC0.54□□□□□ -2.32
Lima1Q9ERG0 Gm26135-201ENSMUST00000101993 72 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Snord71-201ENSMUST00000104361 85 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm22673-201ENSMUST00000104415 131 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm22149-201ENSMUST00000104442 136 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm24499-201ENSMUST00000158446 104 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm23022-201ENSMUST00000158768 180 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm23340-201ENSMUST00000158955 123 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Snord50b-201ENSMUST00000178497 72 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm27540-201ENSMUST00000184950 187 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.53□□□□□ -2.32
Lima1Q9ERG0 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm23614-201ENSMUST00000082598 107 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Snord33-201ENSMUST00000083694 84 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm25627-201ENSMUST00000084003 153 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Mir496a-201ENSMUST00000093627 79 ntBASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Lima1Q9ERG0 Gm22003-201ENSMUST00000101885 107 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Lima1Q9ERG0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm25901-201ENSMUST00000158494 130 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Snora24-201ENSMUST00000174989 130 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm24323-201ENSMUST00000175342 77 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm23410-201ENSMUST00000179967 107 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm22756-201ENSMUST00000180118 107 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Mir7661-201ENSMUST00000197023 61 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm5023-201ENSMUST00000217442 587 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm22505-201ENSMUST00000082956 108 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm22363-201ENSMUST00000083100 108 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm23814-201ENSMUST00000083230 102 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm23095-201ENSMUST00000083446 107 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.52□□□□□ -2.33
Lima1Q9ERG0 Gm11856-201ENSMUST00000118712 276 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm23996-201ENSMUST00000158062 131 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm23898-201ENSMUST00000158111 103 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm20391-201ENSMUST00000174722 106 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm24810-201ENSMUST00000175317 70 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm27668-201ENSMUST00000184188 120 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm22743-201ENSMUST00000083445 133 ntBASIC0.51□□□□□ -2.33
Lima1Q9ERG0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm15379-201ENSMUST00000121224 648 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm26358-201ENSMUST00000158215 97 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm23759-201ENSMUST00000158351 268 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm44465-201ENSMUST00000199536 114 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm23625-201ENSMUST00000082457 100 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm24042-201ENSMUST00000083114 103 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm22294-201ENSMUST00000083308 104 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Mir448-201ENSMUST00000083516 112 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm26329-201ENSMUST00000093723 110 ntBASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
Lima1Q9ERG0 Gm25170-201ENSMUST00000104191 129 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm16032-201ENSMUST00000118534 168 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm14568-201ENSMUST00000119321 294 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm25825-201ENSMUST00000157091 124 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm24440-201ENSMUST00000157236 63 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm24512-201ENSMUST00000174963 65 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm23921-201ENSMUST00000175258 107 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms