Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm26107-201ENSMUST00000083972 107 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm14491-201ENSMUST00000121919 199 ntBASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm34015-201ENSMUST00000194908 451 ntBASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm45616-201ENSMUST00000211711 319 ntBASIC1.27□□□□□ -2.21
Scn4aQ9ER60 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm22294-201ENSMUST00000083308 104 ntBASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Scn4aQ9ER60 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm38050-201ENSMUST00000191904 238 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm42623-201ENSMUST00000197225 379 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm24037-201ENSMUST00000082871 180 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm24258-201ENSMUST00000083739 133 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm24865-201ENSMUST00000103246 96 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm22082-201ENSMUST00000157587 161 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm26285-201ENSMUST00000177923 107 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm29613-201ENSMUST00000185846 313 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm29544-201ENSMUST00000188860 313 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm28808-201ENSMUST00000190978 313 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm44419-201ENSMUST00000203338 229 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm43944-201ENSMUST00000205220 120 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm23622-201ENSMUST00000082460 107 ntBASIC1.26□□□□□ -2.21
Scn4aQ9ER60 Gm22935-201ENSMUST00000103960 104 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm22032-201ENSMUST00000116946 116 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm23277-201ENSMUST00000157914 136 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm25333-201ENSMUST00000158035 246 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm19855-201ENSMUST00000210145 249 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm24966-201ENSMUST00000082443 79 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm23055-201ENSMUST00000082805 94 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Gm24355-201ENSMUST00000082858 122 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Scn4aQ9ER60 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm14922-201ENSMUST00000121131 163 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm25781-201ENSMUST00000122527 84 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm23242-201ENSMUST00000083055 107 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Mir101a-201ENSMUST00000083517 83 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm23851-201ENSMUST00000083831 103 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm14782-201ENSMUST00000120151 195 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm22080-201ENSMUST00000157591 106 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm10105-201ENSMUST00000184601 270 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm10264-201ENSMUST00000220589 429 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm25078-201ENSMUST00000082530 107 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Gm25357-201ENSMUST00000082745 72 ntBASIC1.24□□□□□ -2.21
Scn4aQ9ER60 Mir544-201ENSMUST00000103813 78 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm14980-201ENSMUST00000121247 736 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm26089-201ENSMUST00000157898 107 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm27421-201ENSMUST00000184729 167 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm27977-201ENSMUST00000185159 111 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm45543-201ENSMUST00000209327 88 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm25513-201ENSMUST00000083861 162 ntBASIC1.23□□□□□ -2.21
Scn4aQ9ER60 Gm9059-201ENSMUST00000118319 183 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm24476-201ENSMUST00000157437 131 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm23779-201ENSMUST00000157938 64 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm25128-201ENSMUST00000083339 76 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm11834-201ENSMUST00000122257 585 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm24229-201ENSMUST00000158830 118 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Mir3109-201ENSMUST00000175301 88 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Gm28408-201ENSMUST00000191557 463 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.22□□□□□ -2.21
Scn4aQ9ER60 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Traj60-201ENSMUST00000167781 54 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm27711-201ENSMUST00000183802 118 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm27980-201ENSMUST00000184094 169 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm21064-202ENSMUST00000190583 278 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm43035-201ENSMUST00000197626 517 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm10092-201ENSMUST00000077110 180 ntBASIC1.21□□□□□ -2.22
Scn4aQ9ER60 Gm26135-201ENSMUST00000101993 72 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Gm14039-201ENSMUST00000118705 101 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Gm25914-201ENSMUST00000157618 153 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Gm22163-201ENSMUST00000158408 135 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Snord50b-201ENSMUST00000178497 72 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn4aQ9ER60 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.2□□□□□ -2.22
Scn4aQ9ER60 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm28992-201ENSMUST00000190534 139 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm37918-201ENSMUST00000192071 120 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm11351-202ENSMUST00000225724 478 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm25578-201ENSMUST00000083406 104 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Mir767-201ENSMUST00000103256 107 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm14296-202ENSMUST00000108931 750 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm14298-201ENSMUST00000139032 237 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm16356-201ENSMUST00000143300 169 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm17052-201ENSMUST00000165496 289 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 184 ms