Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm43367-201ENSMUST00000199986 625 ntBASIC-1.08□□□□□ -2.58
Cpsf1Q9EPU4 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.08□□□□□ -2.58
Cpsf1Q9EPU4 Gm25882-201ENSMUST00000157784 85 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Atp2b4-208ENSMUST00000167348 243 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Mir3964-201ENSMUST00000174898 74 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Gm43556-201ENSMUST00000196186 681 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Gm43487-201ENSMUST00000200331 1031 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 AC157476.1-201ENSMUST00000215555 169 ntBASIC-1.09□□□□□ -2.58
Cpsf1Q9EPU4 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm24141-201ENSMUST00000122776 115 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Mir7j-201ENSMUST00000184427 122 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 CT030684.2-201ENSMUST00000228946 826 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm23442-201ENSMUST00000082919 134 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.1□□□□□ -2.59
Cpsf1Q9EPU4 Gm22935-201ENSMUST00000103960 104 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm13475-201ENSMUST00000119290 234 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm13729-201ENSMUST00000120328 406 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm24547-201ENSMUST00000158649 149 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm24713-201ENSMUST00000178850 107 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm25448-201ENSMUST00000180065 107 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.11□□□□□ -2.59
Cpsf1Q9EPU4 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 Gm26415-201ENSMUST00000157673 292 ntBASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 Gm23055-201ENSMUST00000082805 94 ntBASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 Gm22577-201ENSMUST00000083731 109 ntBASIC-1.12□□□□□ -2.59
Cpsf1Q9EPU4 Gm15193-201ENSMUST00000120224 865 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm24854-201ENSMUST00000158025 98 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm25249-201ENSMUST00000175471 78 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Mir3065-201ENSMUST00000198674 87 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm43993-201ENSMUST00000203972 247 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm22576-201ENSMUST00000083733 104 ntBASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC-1.13□□□□□ -2.59
Cpsf1Q9EPU4 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Gm22076-201ENSMUST00000158601 84 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Gm28414-201ENSMUST00000190111 294 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Gm25513-201ENSMUST00000083861 162 ntBASIC-1.14□□□□□ -2.59
Cpsf1Q9EPU4 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm24853-201ENSMUST00000158026 121 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm28196-201ENSMUST00000187719 640 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm23848-201ENSMUST00000083826 106 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm17132-201ENSMUST00000109542 1158 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm11575-201ENSMUST00000122243 228 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm25047-201ENSMUST00000122667 104 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm22118-201ENSMUST00000175593 171 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm44954-201ENSMUST00000208513 227 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 AC164304.1-201ENSMUST00000226920 272 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.15□□□□□ -2.59
Cpsf1Q9EPU4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm23118-201ENSMUST00000122657 187 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm22814-201ENSMUST00000157452 104 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm7925-201ENSMUST00000166690 401 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Snord8-201ENSMUST00000175303 110 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm26071-201ENSMUST00000083261 107 ntBASIC-1.16□□□□□ -2.6
Cpsf1Q9EPU4 Gm23169-201ENSMUST00000157157 112 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Gm25334-201ENSMUST00000158036 110 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Mir100-201ENSMUST00000175270 80 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Mir155-201ENSMUST00000083463 65 ntBASIC-1.17□□□□□ -2.6
Cpsf1Q9EPU4 Gm23898-201ENSMUST00000158111 103 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Gm27676-201ENSMUST00000183669 61 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Gm28439-201ENSMUST00000187714 876 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Gm36953-201ENSMUST00000195295 268 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 AC123656.2-201ENSMUST00000226726 227 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Mir10a-201ENSMUST00000083585 110 ntBASIC-1.18□□□□□ -2.6
Cpsf1Q9EPU4 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.19□□□□□ -2.6
Cpsf1Q9EPU4 Gm14913-201ENSMUST00000120011 1093 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms