Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm22557-201ENSMUST00000157804 102 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Gm24076-201ENSMUST00000158179 94 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Mir497-201ENSMUST00000200557 84 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Gm45386-201ENSMUST00000210194 218 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Mir186-201ENSMUST00000083497 71 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Gm22723-201ENSMUST00000083820 129 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.96□□□□□ -1.94
Upf1Q9EPU0 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Gm24263-201ENSMUST00000104059 107 ntBASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Gm6952-201ENSMUST00000118629 159 ntBASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Gm23655-201ENSMUST00000122627 105 ntBASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Mir1927-201ENSMUST00000158579 109 ntBASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf1Q9EPU0 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Upf1Q9EPU0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Gm25825-201ENSMUST00000157091 124 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Gm22731-201ENSMUST00000158086 94 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Gm27878-201ENSMUST00000184000 106 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.94□□□□□ -1.94
Upf1Q9EPU0 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Snord118-201ENSMUST00000082965 135 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Gm25513-201ENSMUST00000083861 162 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Upf1Q9EPU0 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Gm23983-201ENSMUST00000157142 114 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Gm26160-201ENSMUST00000158965 63 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Gm25071-201ENSMUST00000175232 70 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Mir6376-201ENSMUST00000185149 131 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.93□□□□□ -1.94
Upf1Q9EPU0 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm23718-201ENSMUST00000157350 307 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm23043-201ENSMUST00000157890 109 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Mir669n-201ENSMUST00000158636 54 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm17020-201ENSMUST00000172274 274 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm44052-201ENSMUST00000203382 396 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm18213-201ENSMUST00000207850 178 ntBASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf1Q9EPU0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf1Q9EPU0 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm22148-201ENSMUST00000104445 107 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.91□□□□□ -1.94
Upf1Q9EPU0 Gm13922-201ENSMUST00000119505 156 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm22477-201ENSMUST00000122569 316 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm24394-201ENSMUST00000158141 123 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Rnu7-201ENSMUST00000158458 62 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm24638-201ENSMUST00000179807 132 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm37693-201ENSMUST00000194562 234 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Mir3961-201ENSMUST00000198795 59 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm35736-201ENSMUST00000203681 313 ntBASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.9□□□□□ -1.95
Upf1Q9EPU0 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Gm24837-201ENSMUST00000158683 81 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Gm16546-201ENSMUST00000159442 355 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Gm27851-201ENSMUST00000183529 63 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Upf1Q9EPU0 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Mir155-201ENSMUST00000083463 65 ntBASIC2.89□□□□□ -1.95
Upf1Q9EPU0 Gm25915-201ENSMUST00000104265 126 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm14536-201ENSMUST00000118324 138 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm15027-201ENSMUST00000120922 138 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm22338-201ENSMUST00000157715 129 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm25464-201ENSMUST00000175481 107 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm24167-201ENSMUST00000177733 124 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm24028-201ENSMUST00000178991 124 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm44859-201ENSMUST00000207831 94 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Gm26922-201ENSMUST00000082687 72 ntBASIC2.88□□□□□ -1.95
Upf1Q9EPU0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Upf1Q9EPU0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Mir1298-201ENSMUST00000116681 98 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm22967-201ENSMUST00000157956 239 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm26403-201ENSMUST00000158500 105 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm23337-201ENSMUST00000158959 118 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms