Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm11572-201ENSMUST00000119164 120 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm24192-201ENSMUST00000157978 145 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm22945-201ENSMUST00000158557 157 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Snora24-201ENSMUST00000174989 130 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm23355-201ENSMUST00000177614 107 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm25671-201ENSMUST00000178612 105 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm23307-201ENSMUST00000179167 105 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm25286-201ENSMUST00000179790 105 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm23148-201ENSMUST00000180367 107 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm28344-201ENSMUST00000185704 279 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm25079-201ENSMUST00000082529 203 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm25258-201ENSMUST00000083049 107 ntBASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm42606-201ENSMUST00000114209 239 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Gm11334-201ENSMUST00000121969 156 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Gm22425-201ENSMUST00000158532 138 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Gm27974-201ENSMUST00000183415 105 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Gm27540-201ENSMUST00000184950 187 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Mir344-201ENSMUST00000083634 95 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Gm23851-201ENSMUST00000083831 103 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Snord35a-201ENSMUST00000083884 90 ntBASIC0.86□□□□□ -2.27
Cdc40Q9DC48 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm23991-201ENSMUST00000117033 93 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm11794-201ENSMUST00000119446 237 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm25827-201ENSMUST00000157089 107 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm25982-201ENSMUST00000157920 101 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm24211-201ENSMUST00000158264 107 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm25750-201ENSMUST00000175483 112 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm27420-201ENSMUST00000183823 79 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm19777-201ENSMUST00000191940 358 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm42533-201ENSMUST00000196247 157 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm44358-201ENSMUST00000196301 98 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm44473-201ENSMUST00000204039 152 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 Gm45543-201ENSMUST00000209327 88 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.85□□□□□ -2.27
Cdc40Q9DC48 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm24431-201ENSMUST00000104073 66 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm15002-201ENSMUST00000118406 452 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm14301-201ENSMUST00000120181 324 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm14922-201ENSMUST00000121131 163 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm25011-201ENSMUST00000158398 126 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm26022-201ENSMUST00000158663 108 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm23182-201ENSMUST00000158688 135 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm36946-201ENSMUST00000192706 435 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm43238-201ENSMUST00000196463 359 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm44458-201ENSMUST00000196594 143 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Gm23404-201ENSMUST00000082543 97 ntBASIC0.84□□□□□ -2.27
Cdc40Q9DC48 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm25901-201ENSMUST00000158494 130 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm23474-201ENSMUST00000158884 75 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm22802-201ENSMUST00000175621 89 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm25450-201ENSMUST00000179144 107 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm23793-201ENSMUST00000179396 117 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm28921-201ENSMUST00000190219 378 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm29022-201ENSMUST00000190702 225 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm28288-201ENSMUST00000191019 214 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm25697-201ENSMUST00000082902 98 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.83□□□□□ -2.28
Cdc40Q9DC48 Gm24342-201ENSMUST00000103907 104 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm25496-201ENSMUST00000104430 120 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm11834-201ENSMUST00000122257 585 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm24440-201ENSMUST00000157236 63 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm24512-201ENSMUST00000174963 65 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm27545-201ENSMUST00000184755 202 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm27587-201ENSMUST00000185116 163 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm7654-201ENSMUST00000186738 683 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Gm25851-201ENSMUST00000082794 107 ntBASIC0.82□□□□□ -2.28
Cdc40Q9DC48 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm14980-201ENSMUST00000121247 736 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm24629-201ENSMUST00000122762 89 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm22114-201ENSMUST00000177756 107 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm28661-201ENSMUST00000188231 681 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm44396-201ENSMUST00000199843 114 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm9795-201ENSMUST00000062156 693 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Mir490-201ENSMUST00000093567 84 ntBASIC0.81□□□□□ -2.28
Cdc40Q9DC48 Gm22032-201ENSMUST00000116946 116 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm11248-201ENSMUST00000119568 201 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm22883-201ENSMUST00000157376 106 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm22598-201ENSMUST00000157600 127 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm23898-201ENSMUST00000158111 103 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm20391-201ENSMUST00000174722 106 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm24818-201ENSMUST00000175093 161 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Gm37801-201ENSMUST00000194754 274 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms