Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm25650-201ENSMUST00000083784 162 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24277-201ENSMUST00000158661 104 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20462-201ENSMUST00000172623 408 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24810-201ENSMUST00000175317 70 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23191-201ENSMUST00000179147 107 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24152-201ENSMUST00000082764 163 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm25930-201ENSMUST00000082785 107 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Ccdc3Q9D6Y1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm11334-201ENSMUST00000121969 156 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24288-201ENSMUST00000157630 144 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24499-201ENSMUST00000158446 104 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm45119-201ENSMUST00000207612 199 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24163-201ENSMUST00000093660 132 ntBASIC0.61□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24271-201ENSMUST00000102327 111 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24555-201ENSMUST00000104548 124 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24504-201ENSMUST00000157679 100 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22447-201ENSMUST00000158155 92 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22113-201ENSMUST00000158343 104 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23022-201ENSMUST00000158768 180 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22802-201ENSMUST00000175621 89 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm7958-201ENSMUST00000178255 468 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm7950-201ENSMUST00000179633 468 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm44326-201ENSMUST00000198226 101 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Ccdc3Q9D6Y1 Gm11794-201ENSMUST00000119446 237 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23232-201ENSMUST00000157300 105 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22340-201ENSMUST00000157717 114 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Mir376a-201ENSMUST00000197584 68 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm44396-201ENSMUST00000199843 114 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22884-201ENSMUST00000083127 140 ntBASIC0.59□□□□□ -2.31
Ccdc3Q9D6Y1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm11798-201ENSMUST00000119150 421 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm16358-201ENSMUST00000146046 210 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm28408-201ENSMUST00000191557 463 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm38050-201ENSMUST00000191904 238 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm23625-201ENSMUST00000082457 100 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm24311-201ENSMUST00000082570 104 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Mir33-201ENSMUST00000083531 69 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Gm26107-201ENSMUST00000083972 107 ntBASIC0.58□□□□□ -2.32
Ccdc3Q9D6Y1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm23142-201ENSMUST00000101848 105 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm26240-201ENSMUST00000101893 105 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Mir695-201ENSMUST00000102261 109 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm12748-201ENSMUST00000120763 504 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm22215-201ENSMUST00000157558 96 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm25750-201ENSMUST00000175483 112 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm25633-201ENSMUST00000178565 107 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm10105-201ENSMUST00000184601 270 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm29490-201ENSMUST00000190923 342 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm38060-201ENSMUST00000194822 464 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Mir7661-201ENSMUST00000197023 61 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm43367-201ENSMUST00000199986 625 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm26056-201ENSMUST00000083043 104 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Mir32-201ENSMUST00000083610 70 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm24523-201ENSMUST00000083965 132 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm24445-201ENSMUST00000083981 107 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.57□□□□□ -2.32
Ccdc3Q9D6Y1 Gm24283-201ENSMUST00000104233 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms